CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG95554	Soybean	mitochondrion, nucleus	79.15	79.15
KRH32034	Soybean	mitochondrion	53.71	56.3
KRH71405	Soybean	mitochondrion, nucleus	47.0	50.57
GSMUA_Achr3P25470_001	Banana	mitochondrion	32.86	39.41
VIT_07s0151g00800.t01	Wine grape	mitochondrion, nucleus	39.58	38.23
KRH35505	Soybean	nucleus, plastid	34.63	36.84
KRG91310	Soybean	nucleus, plastid	34.98	36.8
KRH27651	Soybean	plastid	31.8	34.75
GSMUA_Achr1P14130_001	Banana	mitochondrion	34.63	34.27
KRH77839	Soybean	plastid	31.1	33.72
GSMUA_Achr9P25720_001	Banana	nucleus	38.16	32.93
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	31.8	31.91
Os03t0665200-01	Rice	nucleus	30.74	28.81
Zm00001d013595_P001	Maize	mitochondrion	32.51	28.57
EER91113	Sorghum	mitochondrion	31.45	28.34
GSMUA_Achr2P08850_001	Banana	plastid	29.33	27.85
Solyc09g065390.1.1	Tomato	mitochondrion	18.02	27.72
TraesCS4D01G016600.1	Wheat	mitochondrion	27.21	27.5
GSMUA_Achr6P22030_001	Banana	cytosol	27.56	25.83
TraesCS4A01G295300.1	Wheat	plastid	27.21	25.75
Zm00001d032937_P001	Maize	cytosol	25.44	25.53
TraesCS4B01G018400.1	Wheat	plastid	27.21	25.33
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	24.38	24.56
GSMUA_Achr4P22610_001	Banana	nucleus	32.16	24.2
KRH52543	Soybean	nucleus	34.28	22.99
Os10t0422600-01	Rice	endoplasmic reticulum	27.92	22.9
GSMUA_Achr4P21250_001	Banana	nucleus	28.98	22.34
KRH05019	Soybean	nucleus	31.1	22.06
KRH16080	Soybean	nucleus	31.1	21.67
KRH23481	Soybean	plastid	29.68	21.11
KRH09840	Soybean	plastid	29.33	20.91
KRH61879	Soybean	extracellular	32.51	20.77
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	19.79	12.81
HORVU3Hr1G018540.1	Barley	extracellular	3.53	7.69

Protein Annotations

EMBL:ACUP02002048	EnsemblPlants:KRH67235	EnsemblPlantsGene:GLYMA_03G155800	EntrezGene:100800416	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF11	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH67235	ProteinID:KRH67235.1
SEG:seg	UniParc:UPI000233A332	UniProt:I1JNW1	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr3:-:37108444..37110857

Molecular Weight (calculated)

31154.5 Da

IEP (calculated)

8.020

GRAVY (calculated)

-0.556

Length

283 amino acids

Sequence
(BLAST)

001: MLLRNRSRAV TKPGLMADHS TQNSSPNQNY AKTIIPSLFG SPKFRDFTNK CLSSGTEALR SPTSILDARA LSPFAFGSPF STLPNKSSSQ NRTWDKPDSK
101: GGIGLALVGA LKDEDTSISH NSEPNKGNVL LRVKIPFESQ FQTCVDDFGT TKTNNGSKNS SGSGICAKDC CDSPRSGGVL SWSEMELSEE YTCVISHGPN
201: PKATHIFNNC IVVETYCSLP QKHNSHHSAA TSGNFLSFCY TCKKHLDQTK DIFIYRGEKA FCSRECRHRE MMLDGIENLE FEN

Best Arabidopsis Sequence Match ( AT3G63210.1 )
(BLAST)

001: MLRNKPRAAV TTKKQTSLLM ADQPPPPKPN TCHCSPSLFS SPKFRFFTSK MMMTPFDSDF SLVSPTSILE ANPSIFSSKN PKPVSYFEPT IPNPQRFHSP
101: DVFGLADLVK DGDSNRDHSR KPVNKMVLFG SKLRVQIPSS ADFGTKTGIR YPPCQLSPCV QTKVLAVSEI DQTEDYTRVI SHGPNPTITH IFDNSVFVEA
201: TPCSVPLPQP AMETKSTESF LSRCFTCKKN LDQKQDIYIY RGEKGFCSSE CRYQEMLLDQ MET

Arabidopsis Description

MARD1Protein MARD1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGS1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.