CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH27651	Soybean	plastid	82.38	83.01
KRH35505	Soybean	nucleus, plastid	52.11	51.13
KRG91310	Soybean	nucleus, plastid	52.11	50.56
Solyc09g082210.2.1	Tomato	cytosol, plastid	48.66	43.2
PGSC0003DMT400082082	Potato	nucleus, plastid	48.28	41.72
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	44.83	40.07
GSMUA_Achr3P25470_001	Banana	mitochondrion	34.1	37.71
GSMUA_Achr1P14130_001	Banana	mitochondrion	38.7	35.31
KRH32034	Soybean	mitochondrion	35.25	34.07
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	35.63	32.98
GSMUA_Achr2P08850_001	Banana	plastid	36.02	31.54
KRH71405	Soybean	mitochondrion, nucleus	31.42	31.18
KRG95554	Soybean	mitochondrion, nucleus	33.72	31.1
KRH67235	Soybean	mitochondrion, nucleus	33.72	31.1
GSMUA_Achr9P25720_001	Banana	nucleus	37.93	30.18
Os03t0665200-01	Rice	nucleus	33.72	29.14
TraesCS4D01G016600.1	Wheat	mitochondrion	28.35	26.43
Zm00001d032937_P001	Maize	cytosol	27.97	25.89
EER91113	Sorghum	mitochondrion	31.03	25.8
Zm00001d013595_P001	Maize	mitochondrion	31.8	25.78
TraesCS4A01G295300.1	Wheat	plastid	29.12	25.42
GSMUA_Achr4P22610_001	Banana	nucleus	36.4	25.27
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	26.05	24.2
AT1G79970.1	Thale cress	nucleus, plastid	21.84	23.75
GSMUA_Achr6P22030_001	Banana	cytosol	27.2	23.51
GSMUA_Achr4P21250_001	Banana	nucleus	32.95	23.43
TraesCS4B01G018400.1	Wheat	plastid	26.82	23.03
CDX67936	Canola	nucleus, plastid	20.69	21.18
Os10t0422600-01	Rice	endoplasmic reticulum	27.97	21.16
KRH52543	Soybean	nucleus	32.95	20.38
KRH09840	Soybean	plastid	30.65	20.15
CDX79402	Canola	nucleus, plastid	20.69	19.42
KRH23481	Soybean	plastid	29.5	19.35
KRH05019	Soybean	nucleus	29.5	19.3
Bra003541.1-P	Field mustard	nucleus, plastid	20.31	19.06
KRH61879	Soybean	extracellular	31.03	18.28
KRH16080	Soybean	nucleus	27.97	17.98
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	24.9	14.87
HORVU3Hr1G018540.1	Barley	extracellular	4.21	8.46

Protein Annotations

EMBL:ACUP02000685	EnsemblPlants:KRH77839	EnsemblPlantsGene:GLYMA_01G236800	EntrezGene:100806050	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH77838.1	ProteinID:KRH77839
ProteinID:KRH77839.1	ProteinID:KRH77840.1	UniParc:UPI0002337A0D	UniProt:I1JAS2	MapMan:27.3.3	:

Description

hypothetical protein

Coordinates

chr1:+:56204005..56206903

Molecular Weight (calculated)

29161.7 Da

IEP (calculated)

7.091

GRAVY (calculated)

-0.384

Length

261 amino acids

Sequence
(BLAST)

001: MAFSSSSPSI PEKYKKLVSS FFCSPKLFAN FTSKVLCETE AMMSPTYILD TKPFSGLKNP FRSETNSPRT PVGEHKRCWD KLDSKGLVDA LGEITSKSQS
101: RMILFGSQLK IQNHPPLPHA TLSPKSAFGC ANSAFETSKS PRVFSASEMD LSEDYTRVIS HGPNPRTTHI YDNCIVESGC FDVGCSSSPL ENVFLPPHIS
201: YPSESFMSFC FYCNKNLGQD MDIYMYRGER AFCSRECRNQ GMLLEEGMIK LEGGDMYMGH S

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.