Factsheet for Solyc09g082210.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

nucleus 3
plastid 4
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400082082	Potato	nucleus, plastid	93.2	90.73
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	52.38	52.74
KRH35505	Soybean	nucleus, plastid	45.92	50.75
KRG91310	Soybean	nucleus, plastid	46.26	50.56
KRH77839	Soybean	plastid	43.2	48.66
KRH27651	Soybean	plastid	42.18	47.88
GSMUA_Achr3P25470_001	Banana	mitochondrion	33.67	41.95
GSMUA_Achr1P14130_001	Banana	mitochondrion	38.44	39.51
GSMUA_Achr2P08850_001	Banana	plastid	39.12	38.59
GSMUA_Achr9P25720_001	Banana	nucleus	40.82	36.59
Solyc09g065390.1.1	Tomato	mitochondrion	22.45	35.87
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	32.99	34.4
Os03t0665200-01	Rice	nucleus	34.69	33.77
EER91113	Sorghum	mitochondrion	34.69	32.48
GSMUA_Achr4P22610_001	Banana	nucleus	41.16	32.18
TraesCS4D01G016600.1	Wheat	mitochondrion	30.61	32.14
Zm00001d013595_P001	Maize	mitochondrion	34.69	31.68
TraesCS4A01G295300.1	Wheat	plastid	31.29	30.77
GSMUA_Achr6P22030_001	Banana	cytosol	31.29	30.46
GSMUA_Achr4P21250_001	Banana	nucleus	37.07	29.7
TraesCS4B01G018400.1	Wheat	plastid	29.25	28.29
Zm00001d032937_P001	Maize	cytosol	25.51	26.6
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	25.17	26.33
Solyc08g067970.2.1	Tomato	nucleus	35.37	25.62
Os10t0422600-01	Rice	endoplasmic reticulum	27.89	23.77
Solyc06g009000.1.1	Tomato	plastid	22.11	22.57
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	27.55	18.54
HORVU3Hr1G018540.1	Barley	extracellular	4.76	10.77

Protein Annotations

EnsemblPlants:Solyc09g082210.2.1	EnsemblPlantsGene:Solyc09g082210.2	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF26
PFAM:PF04570	PFscan:PS51795	SEG:seg	UniParc:UPI000276BF69	UniProt:K4CVJ8	MapMan:27.3.3

Description

No Description!

Coordinates

chr9:-:68019601..68022150

Molecular Weight (calculated)

32436.3 Da

IEP (calculated)

5.438

GRAVY (calculated)

-0.451

Length

294 amino acids

Sequence
(BLAST)

001: MADYNSLPFP MENSRKTSSF FGSPRLFTCF AAKGFPDTES IMSPTSILDS KPFTVLRNPF WSEPKSPKPE SRVHFQKLDS KGVGLGLVDA LIDEKSDSKE
101: MNSVSRMVVL GSQLKIQIPT LPPTFNYPTD SPPSPGDFGI KTRNSQLGSL SPVKKSPFGS SNSNIDIPNS PGAFSSLSAA EMELSEEYTC VISHGPNPRT
201: THIFDDCILE SCCGVVKYSA SRKENETFTS PPMCYPSESF LSFCHNCKKN LGIGKDIYMY RGEKAFCSSD CRYKEMMLEE GMDKSEIDDN VFGG

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.