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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion

Predictor Summary:
  • plastid 2
  • mitochondrion 6
  • nucleus 2
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc09g082210.2.1 Tomato cytosol, plastid 35.87 22.45
VIT_07s0151g00800.t01 Wine grape mitochondrion, nucleus 33.7 21.16
KRH32034 Soybean mitochondrion 30.98 21.11
GSMUA_Achr3P25470_001 Banana mitochondrion 26.63 20.76
GSMUA_Achr1P14130_001 Banana mitochondrion 32.07 20.63
GSMUA_Achr8P20380_001 Banana mitochondrion, nucleus 30.98 20.21
KRH71405 Soybean mitochondrion, nucleus 28.26 19.77
TraesCS4D01G016600.1 Wheat mitochondrion 29.89 19.64
Os03t0665200-01 Rice nucleus 32.07 19.54
KRG95554 Soybean mitochondrion, nucleus 29.89 19.43
GSMUA_Achr6P22030_001 Banana cytosol 31.52 19.21
TraesCS4A01G295300.1 Wheat plastid 30.98 19.06
KRH67235 Soybean mitochondrion, nucleus 27.72 18.02
GSMUA_Achr2P08850_001 Banana plastid 28.8 17.79
GSMUA_Achr9P25720_001 Banana nucleus 31.52 17.68
EER91113 Sorghum mitochondrion 29.89 17.52
TraesCS4B01G018400.1 Wheat plastid 28.8 17.43
Zm00001d013595_P001 Maize mitochondrion 30.43 17.39
GSMUA_Achr4P22610_001 Banana nucleus 34.78 17.02
Solyc06g009000.1.1 Tomato plastid 26.63 17.01
GSMUA_Achr4P21250_001 Banana nucleus 29.35 14.71
Os10t0422600-01 Rice endoplasmic reticulum 25.54 13.62
Zm00001d032937_P001 Maize cytosol 19.57 12.77
EER94230 Sorghum cytosol, endoplasmic reticulum, nucleus 19.02 12.46
Solyc08g067970.2.1 Tomato nucleus 27.17 12.32
HORVU4Hr1G002700.4 Barley cytosol, golgi, mitochondrion 27.72 11.67
HORVU3Hr1G018540.1 Barley extracellular 4.35 6.15
Protein Annotations
EnsemblPlants:Solyc09g065390.1.1EnsemblPlantsGene:Solyc09g065390.1PANTHER:PTHR33059PANTHER:PTHR33059:SF11UniParc:UPI000276C71BUniProt:K4CUG6
MapMan:35.2:::::
Description
No Description!
Coordinates
chr9:-:63506909..63507463
Molecular Weight (calculated)
20435.3 Da
IEP (calculated)
8.046
GRAVY (calculated)
-0.558
Length
184 amino acids
Sequence
(BLAST)
001: MLMVMLRNNS RRAVSSKQSP NPMADKNSSS SPKFFNGFLT RTLSDVFDSE ISPKSILDTK QIFNLGNPFG YDRNSSYKKG SSTLEGIKLA LLDPIENEEN
101: INKMVVFGTE LKDFGIKTKD SKLLGIGNVK EDKDSSKGGL SLREMESLED YTCVITHGPN PKKTHIFDNC VVQSCSVLEN SPDR
Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)
001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK
Arabidopsis Description
NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.