CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, nucleus

Predictor Summary:

nucleus 4
plastid 1
mitochondrion 4
cytosol 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH67235	Soybean	mitochondrion, nucleus	79.15	79.15
KRH32034	Soybean	mitochondrion	53.0	55.56
KRH71405	Soybean	mitochondrion, nucleus	43.11	46.39
VIT_07s0151g00800.t01	Wine grape	mitochondrion, nucleus	40.64	39.25
KRG91310	Soybean	nucleus, plastid	37.1	39.03
GSMUA_Achr3P25470_001	Banana	mitochondrion	32.51	38.98
KRH35505	Soybean	nucleus, plastid	35.69	37.97
KRH27651	Soybean	plastid	31.8	34.75
GSMUA_Achr9P25720_001	Banana	nucleus	39.22	33.84
KRH77839	Soybean	plastid	31.1	33.72
GSMUA_Achr1P14130_001	Banana	mitochondrion	32.51	32.17
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	31.1	31.21
Solyc09g065390.1.1	Tomato	mitochondrion	19.43	29.89
EER91113	Sorghum	mitochondrion	30.39	27.39
Os03t0665200-01	Rice	nucleus	28.98	27.15
GSMUA_Achr2P08850_001	Banana	plastid	28.27	26.85
Zm00001d013595_P001	Maize	mitochondrion	30.39	26.71
TraesCS4D01G016600.1	Wheat	mitochondrion	26.15	26.43
Zm00001d032937_P001	Maize	cytosol	26.15	26.24
GSMUA_Achr6P22030_001	Banana	cytosol	27.92	26.16
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	25.44	25.62
TraesCS4A01G295300.1	Wheat	plastid	26.15	24.75
GSMUA_Achr4P22610_001	Banana	nucleus	31.8	23.94
TraesCS4B01G018400.1	Wheat	plastid	24.73	23.03
Os10t0422600-01	Rice	endoplasmic reticulum	27.92	22.9
GSMUA_Achr4P21250_001	Banana	nucleus	29.68	22.89
KRH52543	Soybean	nucleus	33.57	22.51
KRH23481	Soybean	plastid	30.74	21.86
KRH61879	Soybean	extracellular	33.57	21.44
KRH16080	Soybean	nucleus	30.74	21.43
KRH05019	Soybean	nucleus	30.04	21.3
KRH09840	Soybean	plastid	27.92	19.9
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	17.67	11.44
HORVU3Hr1G018540.1	Barley	extracellular	4.24	9.23

Protein Annotations

EMBL:ACUP02012119	EMBL:BT093385	EnsemblPlants:KRG95554	EnsemblPlantsGene:GLYMA_19G158100	EntrezGene:100788456	InterPro:IPR007650
InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF11	PFAM:PF04570	PFscan:PS51795	ProteinID:KRG95554
ProteinID:KRG95554.1	SEG:seg	UniParc:UPI0001B16589	UniProt:C6T7F7	MapMan:27.3.3	:

Description

hypothetical protein

Coordinates

chr19:-:41876068..41878498

Molecular Weight (calculated)

31165.7 Da

IEP (calculated)

8.295

GRAVY (calculated)

-0.515

Length

283 amino acids

Sequence
(BLAST)

001: MLLRNRSRAV TKPGLMADHG TQNSPNQNYA KTIPSLFGSP KFRDFTNKCL SSGTEALRSP TSILDARALS PFAFGNPFST LPNKTSSPNR TSWDKPDSKG
101: IGLALVGALK DDDNPICHNS EPKKGNVLLR VRIPFESQFQ TCVDDFGIAK TNGSKNSSGS GICSKDCCDS PRSGGVLSWS AMELSEEYTC VISHGPIPKA
201: THIFNNCIMV ETYYSLPPKQ NSHSAATSGN FLSFCYTCKK HLDQTKDIFI YRGEKAFCSR ECRHREMMLD GIENLEFESN GYS

Best Arabidopsis Sequence Match ( AT3G63210.1 )
(BLAST)

001: MLRNKPRAAV TTKKQTSLLM ADQPPPPKPN TCHCSPSLFS SPKFRFFTSK MMMTPFDSDF SLVSPTSILE ANPSIFSSKN PKPVSYFEPT IPNPQRFHSP
101: DVFGLADLVK DGDSNRDHSR KPVNKMVLFG SKLRVQIPSS ADFGTKTGIR YPPCQLSPCV QTKVLAVSEI DQTEDYTRVI SHGPNPTITH IFDNSVFVEA
201: TPCSVPLPQP AMETKSTESF LSRCFTCKKN LDQKQDIYIY RGEKGFCSSE CRYQEMLLDQ MET

Arabidopsis Description

MARD1Protein MARD1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGS1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.