CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

nucleus 4
plastid 3
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG91310	Soybean	nucleus, plastid	90.23	89.22
KRH27651	Soybean	plastid	54.51	55.98
KRH77839	Soybean	plastid	51.13	52.11
Solyc09g082210.2.1	Tomato	cytosol, plastid	50.75	45.92
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	50.0	45.55
PGSC0003DMT400082082	Potato	nucleus, plastid	50.38	44.37
GSMUA_Achr3P25470_001	Banana	mitochondrion	37.59	42.37
KRH32034	Soybean	mitochondrion	37.22	36.67
GSMUA_Achr1P14130_001	Banana	mitochondrion	39.1	36.36
KRG95554	Soybean	mitochondrion, nucleus	37.97	35.69
KRH67235	Soybean	mitochondrion, nucleus	36.84	34.63
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	36.09	34.04
GSMUA_Achr9P25720_001	Banana	nucleus	40.6	32.93
Os03t0665200-01	Rice	nucleus	36.84	32.45
KRH71405	Soybean	mitochondrion, nucleus	31.95	32.32
GSMUA_Achr2P08850_001	Banana	plastid	36.09	32.21
TraesCS4D01G016600.1	Wheat	mitochondrion	31.95	30.36
Zm00001d032937_P001	Maize	cytosol	31.58	29.79
EER91113	Sorghum	mitochondrion	34.59	29.3
Zm00001d013595_P001	Maize	mitochondrion	35.34	29.19
TraesCS4A01G295300.1	Wheat	plastid	31.58	28.09
GSMUA_Achr6P22030_001	Banana	cytosol	30.83	27.15
TraesCS4B01G018400.1	Wheat	plastid	30.83	26.97
GSMUA_Achr4P22610_001	Banana	nucleus	37.22	26.33
GSMUA_Achr4P21250_001	Banana	nucleus	34.96	25.34
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	26.69	25.27
Os10t0422600-01	Rice	endoplasmic reticulum	31.95	24.64
CDX67936	Canola	nucleus, plastid	22.93	23.92
AT1G79970.1	Thale cress	nucleus, plastid	21.43	23.75
CDX79402	Canola	nucleus, plastid	24.81	23.74
KRH05019	Soybean	nucleus	32.71	21.8
KRH23481	Soybean	plastid	32.33	21.61
Bra003541.1-P	Field mustard	nucleus, plastid	22.56	21.58
KRH09840	Soybean	plastid	31.95	21.41
KRH52543	Soybean	nucleus	32.71	20.62
KRH16080	Soybean	nucleus	30.83	20.2
KRH61879	Soybean	extracellular	33.08	19.86
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	25.56	15.56
HORVU3Hr1G018540.1	Barley	extracellular	4.89	10.0

Protein Annotations

EMBL:ACUP02006683	EnsemblPlants:KRH35505	EnsemblPlantsGene:GLYMA_10G247000	EntrezGene:100776509	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH35505	ProteinID:KRH35505.1
ProteinID:KRH35506.1	ProteinID:KRH35507.1	SEG:seg	UniParc:UPI000233CADA	UniProt:I1LE36	MapMan:27.3.3

Description

hypothetical protein

Coordinates

chr10:+:47533528..47537120

Molecular Weight (calculated)

29531.5 Da

IEP (calculated)

6.612

GRAVY (calculated)

-0.612

Length

266 amino acids

Sequence
(BLAST)

001: MADSEKYNKK PSSSSFFSSP RLFTNFTPKG SHETETMMSP TSTLDSKPFS GFKNPFWSET NSPRTPGSEH KRYWDKLDSK GVGLGLVDAL VDEDKHGGEV
101: SSKSESRMVL FGSQLKIQIP PLSPSESSKF VAEKGKCASG VADANNSQRV FVGCLSASEM ELSEDYTRVI SRGPNPRTTH IFDNCIIESS CFELGCSASS
201: AKENGCFLDH TSYHSRSFLS VCFHCKKNLG QGKDIYMYRG ERAFCSNECR YQGMLLEEEM SQLEAQ

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.