CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

nucleus 3
plastid 7

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH77839	Soybean	plastid	83.01	82.38
KRH35505	Soybean	nucleus, plastid	55.98	54.51
KRG91310	Soybean	nucleus, plastid	54.83	52.79
VIT_05s0020g03670.t01	Wine grape	nucleus, plastid	48.65	43.15
Solyc09g082210.2.1	Tomato	cytosol, plastid	47.88	42.18
PGSC0003DMT400082082	Potato	nucleus, plastid	48.26	41.39
GSMUA_Achr3P25470_001	Banana	mitochondrion	37.45	41.1
GSMUA_Achr1P14130_001	Banana	mitochondrion	41.7	37.76
KRH32034	Soybean	mitochondrion	37.07	35.56
GSMUA_Achr8P20380_001	Banana	mitochondrion, nucleus	37.45	34.4
GSMUA_Achr2P08850_001	Banana	plastid	38.61	33.56
GSMUA_Achr9P25720_001	Banana	nucleus	41.31	32.62
KRH71405	Soybean	mitochondrion, nucleus	32.82	32.32
KRH67235	Soybean	mitochondrion, nucleus	34.75	31.8
KRG95554	Soybean	mitochondrion, nucleus	34.75	31.8
Os03t0665200-01	Rice	nucleus	35.91	30.79
TraesCS4D01G016600.1	Wheat	mitochondrion	30.5	28.21
Zm00001d032937_P001	Maize	cytosol	30.12	27.66
EER91113	Sorghum	mitochondrion	33.2	27.39
TraesCS4A01G295300.1	Wheat	plastid	31.27	27.09
Zm00001d013595_P001	Maize	mitochondrion	33.59	27.02
GSMUA_Achr4P21250_001	Banana	nucleus	35.91	25.34
GSMUA_Achr4P22610_001	Banana	nucleus	36.68	25.27
TraesCS4B01G018400.1	Wheat	plastid	29.34	25.0
GSMUA_Achr6P22030_001	Banana	cytosol	28.96	24.83
EER94230	Sorghum	cytosol, endoplasmic reticulum, nucleus	26.25	24.2
AT1G79970.1	Thale cress	nucleus, plastid	21.62	23.33
CDX79402	Canola	nucleus, plastid	23.55	21.94
Os10t0422600-01	Rice	endoplasmic reticulum	28.96	21.74
CDX67936	Canola	nucleus, plastid	21.24	21.57
KRH52543	Soybean	nucleus	34.36	21.09
KRH09840	Soybean	plastid	32.05	20.91
KRH23481	Soybean	plastid	31.66	20.6
Bra003541.1-P	Field mustard	nucleus, plastid	21.62	20.14
KRH05019	Soybean	nucleus	30.89	20.05
KRH61879	Soybean	extracellular	32.82	19.19
KRH16080	Soybean	nucleus	29.34	18.72
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	26.64	15.79
HORVU3Hr1G018540.1	Barley	extracellular	4.63	9.23

Protein Annotations

EMBL:ACUP02006731	EnsemblPlants:KRH27651	EnsemblPlantsGene:GLYMA_11G006400	EntrezGene:100803983	InterPro:IPR007650	InterPro:Zf-FLZ_dom
PANTHER:PTHR33059	PANTHER:PTHR33059:SF26	PFAM:PF04570	PFscan:PS51795	ProteinID:KRH27650.1	ProteinID:KRH27651
ProteinID:KRH27651.1	UniParc:UPI000233C559	UniProt:I1LFU6	MapMan:27.3.3	:	:

Description

hypothetical protein

Coordinates

chr11:-:455571..458167

Molecular Weight (calculated)

28946.3 Da

IEP (calculated)

6.916

GRAVY (calculated)

-0.412

Length

259 amino acids

Sequence
(BLAST)

001: MAFSSSSPSI PEKYKKLVSS FFSSPKLFAN FTSKVLCETE AMMSPTSILD TKPFSGLKNP FWSETNSPRT PVGEHKRYWD KLDSKGLVDA LGEITSKSQS
101: RMILFGSQLK IQNHPPLAHS TLSPSLSPKS AFGCANSALE TSKSPRVFSA SEMELSEDYT RVISHGPNPR TTHIFDNCII ESRCFDVGCS SSPLENVFLP
201: PHISYPSETF MSFCFYCNKN LGQDMDIYMY RGERAFCSRE CRDQGMMLEE GGDMHMGHS

Best Arabidopsis Sequence Match ( AT3G22550.1 )
(BLAST)

001: MLKKRSRSKQ ALMAETNQSQ NQKQSKTTPF PRLFTAFSSF KSFTENDAVA SPTSILDTKP FSVLKNPFGS DNPKTQEPET RLKLEPKRIG LAIVDSLIQD
101: ETPEPGPRSG TILFGSQLRI RVPDSPISSS DFGIKTRNSQ PETKKPGSES GLGSPRIISG YFPASDMELS EDYTCVTCHG PNPRTIHIFD NCIVESQPGV
201: VFFRSSDPVN ESDSDYSPPD SFLSCCCNCK KSLGPRDDIF MYRGDRAFCS SECRSIEMMM SEENDTK

Arabidopsis Description

NAD(P)H-quinone oxidoreductase subunit, putative (DUF581) [Source:UniProtKB/TrEMBL;Acc:Q8L471]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.