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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plastid

Predictor Summary:
  • nucleus 1
  • plastid 5
  • cytosol 1
  • extracellular 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra023326.1-P Field mustard plastid 75.22 74.56
CDX69754 Canola nucleus, plastid 49.12 40.36
CDX97112 Canola nucleus, plastid 46.02 37.96
AT5G11460.1 Thale cress cytosol, plastid 40.27 26.45
CDY11512 Canola nucleus 32.3 24.33
CDX76742 Canola nucleus 31.42 23.67
CDX76690 Canola plastid 23.89 23.08
CDY56452 Canola plastid 23.89 22.88
Os01t0593200-01 Rice nucleus 25.66 22.31
CDY38508 Canola cytosol 30.53 22.19
CDY65610 Canola mitochondrion, nucleus 25.66 21.64
CDX83224 Canola cytosol 30.97 21.47
Os01t0719000-01 Rice cytosol 24.78 21.37
TraesCS3B01G323700.2 Wheat cytosol 25.22 21.11
CDX98213 Canola mitochondrion 24.34 20.99
CDY34246 Canola mitochondrion 24.34 20.99
CDX92948 Canola mitochondrion 24.34 20.83
Os01t0180400-01 Rice cytosol 17.26 20.74
CDX93919 Canola nucleus 21.24 20.08
TraesCS3D01G288800.1 Wheat cytosol 23.89 20.07
HORVU3Hr1G068120.1 Barley cytosol 23.01 20.0
TraesCS3A01G289000.1 Wheat cytosol 23.89 19.93
CDY24316 Canola mitochondrion, plastid 19.03 19.72
PGSC0003DMT400037607 Potato nucleus 34.07 19.59
Zm00001d044365_P001 Maize cytosol 22.57 19.32
VIT_04s0008g04490.t01 Wine grape nucleus 34.96 19.22
EES00998 Sorghum cytosol, plastid 23.01 19.19
TraesCS3D01G215200.1 Wheat nucleus 23.01 19.05
HORVU3Hr1G051540.1 Barley cytosol 22.57 18.68
Solyc08g067970.2.1 Tomato nucleus 33.19 18.47
TraesCS3A01G212800.1 Wheat nucleus 22.12 18.38
EES01375 Sorghum plastid 20.8 17.87
GSMUA_AchrUn_... Banana nucleus 27.43 17.71
GSMUA_Achr7P13270_001 Banana nucleus 28.32 17.53
TraesCS3B01G243000.2 Wheat nucleus 24.34 17.46
Zm00001d043612_P002 Maize plastid 19.47 17.32
EES00181 Sorghum cytosol, extracellular, nucleus 21.24 16.9
TraesCS3A01G117700.1 Wheat cytosol 26.11 16.71
TraesCS3B01G137000.1 Wheat cytosol 25.66 16.48
TraesCS3D01G119500.1 Wheat cytosol 25.66 16.25
Zm00001d039597_P001 Maize cytosol 25.22 16.06
KRH05019 Soybean nucleus 28.32 16.04
Zm00001d008782_P001 Maize nucleus 24.78 15.86
KRH52543 Soybean nucleus 29.2 15.64
CDX67936 Canola nucleus, plastid 17.26 15.29
KRH61879 Soybean extracellular 28.76 14.67
KRH16080 Soybean nucleus 26.11 14.53
GSMUA_Achr7P09810_001 Banana mitochondrion 26.11 14.22
Os05t0180500-01 Rice cytosol 20.35 14.07
CDY53722 Canola extracellular, vacuole 22.57 13.93
OQU77551 Sorghum mitochondrion, plastid 22.57 13.75
TraesCS1B01G139200.1 Wheat plastid 21.68 13.39
TraesCS1D01G120700.1 Wheat cytosol, extracellular, plastid 23.01 13.16
CDX79402 Canola nucleus, plastid 15.93 12.95
HORVU1Hr1G026780.1 Barley cytosol, extracellular, plastid 19.03 11.98
Zm00001d037713_P001 Maize cytosol 16.81 11.59
TraesCS1A01G119800.1 Wheat plastid 19.91 11.39
HORVU3Hr1G021650.1 Barley nucleus 21.68 11.14
GSMUA_Achr10P... Banana cytosol, mitochondrion 14.6 9.91
Protein Annotations
EnsemblPlants:CDX85711EnsemblPlantsGene:GSBRNA2T00143457001InterPro:IPR007650InterPro:Zf-FLZ_domPANTHER:PTHR33059PANTHER:PTHR33059:SF15
PFAM:PF04570PFscan:PS51795ProteinID:CDX85711ProteinID:CDX85711.1SEG:segUniParc:UPI0004EE5D02
MapMan:27.3.3:::::
Description
BnaA02g01020D
Coordinates
chrLK031842:+:1383458..1384262
Molecular Weight (calculated)
25197.8 Da
IEP (calculated)
5.717
GRAVY (calculated)
-0.365
Length
226 amino acids
Sequence
(BLAST)
001: MSQHPNNQMA SGSVFYLTKP ESSGLKNNTI SSCVSDYEAA WSPTSPLEFV LFPSLVNPFG GSSLSSIRKT HKKSWDSGKV GLSIVDSLDD DHHTESSRIL
101: LPSPDSKNII FESLLRTRNT FVNNNNNACL ESVDSKEMKR RCCGIKKESI FVIAPLDLTT ITDVLVLPPN DFLSSCFFCN KKLGMGKDIY MYRGYKAFCS
201: VECRLEVIYQ DEKMEEEEAK SGSSSE
Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [cytosol,plastid]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.