Factsheet for Os05t0180500-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
OQU77551	Sorghum	mitochondrion, plastid	51.07	45.01
Zm00001d037713_P001	Maize	cytosol	44.34	44.21
Os01t0180400-01	Rice	cytosol	22.32	38.83
TraesCS1B01G139200.1	Wheat	plastid	42.51	37.98
HORVU1Hr1G026780.1	Barley	cytosol, extracellular, plastid	40.98	37.33
TraesCS1A01G119800.1	Wheat	plastid	44.34	36.71
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	40.98	33.92
GSMUA_AchrUn_...	Banana	nucleus	31.19	29.14
GSMUA_Achr7P13270_001	Banana	nucleus	32.42	29.04
Os01t0593200-01	Rice	nucleus	22.32	28.08
CDX97112	Canola	nucleus, plastid	22.32	26.64
Bra008960.1-P	Field mustard	nucleus, plastid	22.32	26.55
CDX69754	Canola	nucleus, plastid	21.71	25.82
Bra007780.1-P	Field mustard	nucleus	22.94	25.34
Os03t0665200-01	Rice	nucleus	23.24	25.17
Bra000551.1-P	Field mustard	cytosol, mitochondrion	19.57	25.1
CDY11512	Canola	nucleus	22.63	24.67
VIT_04s0008g04490.t01	Wine grape	nucleus	30.58	24.33
Os01t0719000-01	Rice	cytosol	19.27	24.05
CDX76742	Canola	nucleus	22.02	24.0
CDY38508	Canola	cytosol	22.63	23.79
Solyc08g067970.2.1	Tomato	nucleus	28.75	23.15
CDX83224	Canola	cytosol	22.94	23.01
PGSC0003DMT400037607	Potato	nucleus	27.52	22.9
Os10t0422600-01	Rice	endoplasmic reticulum	23.55	22.32
KRH05019	Soybean	nucleus	27.22	22.31
AT2G25690.1	Thale cress	cytosol	22.02	22.22
KRH09840	Soybean	plastid	26.91	22.17
KRH23481	Soybean	plastid	26.91	22.11
KRH52543	Soybean	nucleus	28.44	22.04
KRH16080	Soybean	nucleus	27.22	21.92
AT5G11460.1	Thale cress	cytosol, plastid	22.32	21.22
CDX85711	Canola	plastid	14.07	20.35
Bra023326.1-P	Field mustard	plastid	14.07	20.18
KRH61879	Soybean	extracellular	26.91	19.86

Protein Annotations

EnsemblPlants:Os05t0180500-01	EnsemblPlantsGene:Os05g0180500	EntrezGene:4337981	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059
PANTHER:PTHR33059:SF12	PFAM:PF04570	PFscan:PS51795	ProteinID:AAW57809.1	ProteinID:BAS92557.1	RefSeq:XP_015638223.1
SEG:seg	UniParc:UPI00004C3D25	UniProt:Q5KQK2	MapMan:27.3.3	:	:

Description

Hypothetical conserved gene. (Os05t0180500-01)

Coordinates

chr5:-:4837556..4839806

Molecular Weight (calculated)

34014.5 Da

IEP (calculated)

5.762

GRAVY (calculated)

-0.137

Length

327 amino acids

Sequence
(BLAST)

001: MLRRVAVAPP DAGDAADGKP RGGAAALFKV PRLLVGMAAA AAAARPCECD SPVRSPTSPL DLRAFAAPPL LRSPRSWDAR RAGLGGLIDD GLAEPPGAAA
101: MSRLLMPQMR PTKPRPCGPA QPELGNAVGA AAGMSVPCSS RFYGDVKSGP EVTVAGAAQL RVNGGVHAAA ADLGKFPATG SLPASIGRPL PQYIGSVSAT
201: EVEQSEDYTR IIARGPNPKT THIFGDCILE PCTESYWLVK LSGSGDELRR LCSSCKKLDG SDLCFYRGEK AFCSGDCREQ EILIEDEEES NTAVSSPISI
301: GSSSSFHDDL FMAGMAVLDM STSSPHA

Best Arabidopsis Sequence Match ( AT3G63210.1 )
(BLAST)

001: MLRNKPRAAV TTKKQTSLLM ADQPPPPKPN TCHCSPSLFS SPKFRFFTSK MMMTPFDSDF SLVSPTSILE ANPSIFSSKN PKPVSYFEPT IPNPQRFHSP
101: DVFGLADLVK DGDSNRDHSR KPVNKMVLFG SKLRVQIPSS ADFGTKTGIR YPPCQLSPCV QTKVLAVSEI DQTEDYTRVI SHGPNPTITH IFDNSVFVEA
201: TPCSVPLPQP AMETKSTESF LSRCFTCKKN LDQKQDIYIY RGEKGFCSSE CRYQEMLLDQ MET

Arabidopsis Description

MARD1Protein MARD1 [Source:UniProtKB/Swiss-Prot;Acc:Q8LGS1]
SUBAcon: [mitochondrion,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.