Factsheet for HORVU1Hr1G026780.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, cytosol, plastid

Predictor Summary:

extracellular 3
golgi 2
plasma membrane 2
endoplasmic reticulum 2
vacuole 2
plastid 2
mitochondrion 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, extracellular, plastid
Any Predictor:	cytosol, mitochondrion, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1A01G119800.1	Wheat	plastid	75.77	68.86
TraesCS1B01G139200.1	Wheat	plastid	56.55	55.46
TraesCS1D01G120700.1	Wheat	cytosol, extracellular, plastid	53.2	48.35
Zm00001d037713_P001	Maize	cytosol	38.44	42.07
Os05t0180500-01	Rice	cytosol	37.33	40.98
OQU77551	Sorghum	mitochondrion, plastid	38.16	36.93
GSMUA_Achr7P13270_001	Banana	nucleus	25.07	24.66
GSMUA_AchrUn_...	Banana	nucleus	23.4	24.0
Bra000551.1-P	Field mustard	cytosol, mitochondrion	16.99	23.92
HORVU3Hr1G068120.1	Barley	cytosol	17.27	23.85
Bra008960.1-P	Field mustard	nucleus, plastid	18.11	23.64
CDX76742	Canola	nucleus	19.5	23.33
Bra007780.1-P	Field mustard	nucleus	19.22	23.31
CDY11512	Canola	nucleus	19.22	23.0
CDX69754	Canola	nucleus, plastid	17.55	22.91
CDX97112	Canola	nucleus, plastid	17.27	22.63
CDY38508	Canola	cytosol	19.5	22.51
HORVU3Hr1G051540.1	Barley	cytosol	16.99	22.34
KRH23481	Soybean	plastid	23.4	21.11
VIT_04s0008g04490.t01	Wine grape	nucleus	23.96	20.92
KRH05019	Soybean	nucleus	23.12	20.8
KRH09840	Soybean	plastid	22.84	20.65
CDX83224	Canola	cytosol	18.66	20.55
AT2G25690.1	Thale cress	cytosol	18.11	20.06
HORVU3Hr1G021650.1	Barley	nucleus	24.51	20.0
Bra023326.1-P	Field mustard	plastid	12.53	19.74
PGSC0003DMT400037607	Potato	nucleus	21.45	19.59
KRH16080	Soybean	nucleus	22.01	19.46
Solyc08g067970.2.1	Tomato	nucleus	22.01	19.46
KRH52543	Soybean	nucleus	22.84	19.43
CDX85711	Canola	plastid	11.98	19.03
AT5G11460.1	Thale cress	cytosol, plastid	17.55	18.31
KRH61879	Soybean	extracellular	21.73	17.61
HORVU4Hr1G002700.4	Barley	cytosol, golgi, mitochondrion	17.55	14.42
HORVU3Hr1G018540.1	Barley	extracellular	4.74	13.08

Protein Annotations

EnsemblPlants:HORVU1Hr1G026780.1	EnsemblPlantsGene:HORVU1Hr1G026780	InterPro:IPR007650	InterPro:Zf-FLZ_dom	PANTHER:PTHR33059	PANTHER:PTHR33059:SF12
PFAM:PF04570	PFscan:PS51795	SEG:seg	UniParc:UPI000295B2F3	UniProt:M0VAT3	MapMan:27.3.3

Description

No Description!

Coordinates

chrchr1H:+:136785040..136787127

Molecular Weight (calculated)

37999.7 Da

IEP (calculated)

4.817

GRAVY (calculated)

-0.303

Length

359 amino acids

Sequence
(BLAST)

001: MRDCFLVSAA PIPCRLSLSD HIFGFVFRAP GPGGREGRMM LRRVVFDQAA AGDALDGAAG GRPRSPAFFA VPRLLVGLAA TKRGTPDCDS TARASLLGSP
101: RSPRSWDSQR VGLGGLVDSL AEPAADAKNR LLGFQMRPTK LQCLAKSYTS PPKDCGHAQP ELGEAEATAG AGGMSVPCTR FYGDVKSGPE VIVSGGAQLH
201: LVDRAKFPAS GSLPVSIGGP RRYIGSVSAM EVEQSEDYTC IIAHGSNPKT TRIFGDCILE PCPVLMPDWE SKEIDVDKEG AELYWLVADE ESTPGSCSAC
301: NKDLDGNGSY VYRGENAFCG GNCRNQAVLN KDEDENNPAV SSPSSPSSTS QLDEDDIFT

Best Arabidopsis Sequence Match ( AT5G11460.1 )
(BLAST)

001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG

Arabidopsis Description

At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [cytosol,plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.