Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- plastid 5
- cytosol 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX85711 | Canola | plastid | 74.56 | 75.22 |
| Bra008960.1-P | Field mustard | nucleus, plastid | 40.79 | 33.82 |
| AT5G11460.1 | Thale cress | cytosol, plastid | 45.18 | 29.94 |
| Bra007780.1-P | Field mustard | nucleus | 31.14 | 23.99 |
| Bra007736.1-P | Field mustard | plastid | 23.68 | 23.18 |
| Bra000551.1-P | Field mustard | cytosol, mitochondrion | 25.88 | 23.14 |
| Bra039962.1-P | Field mustard | mitochondrion, nucleus | 26.75 | 22.76 |
| Bra001873.1-P | Field mustard | mitochondrion | 24.56 | 21.21 |
| Os01t0593200-01 | Rice | nucleus | 24.12 | 21.15 |
| HORVU3Hr1G068120.1 | Barley | cytosol | 23.68 | 20.77 |
| Os01t0180400-01 | Rice | cytosol | 17.11 | 20.74 |
| TraesCS3B01G323700.2 | Wheat | cytosol | 24.56 | 20.74 |
| Bra023820.1-P | Field mustard | mitochondrion | 23.68 | 20.61 |
| Os01t0719000-01 | Rice | cytosol | 23.68 | 20.61 |
| TraesCS3D01G288800.1 | Wheat | cytosol | 24.12 | 20.45 |
| Zm00001d044365_P001 | Maize | cytosol | 23.25 | 20.08 |
| TraesCS3A01G289000.1 | Wheat | cytosol | 23.68 | 19.93 |
| GSMUA_AchrUn_... | Banana | nucleus | 28.51 | 18.57 |
| Zm00001d043612_P002 | Maize | plastid | 20.61 | 18.5 |
| EES00998 | Sorghum | cytosol, plastid | 21.93 | 18.45 |
| HORVU3Hr1G051540.1 | Barley | cytosol | 21.93 | 18.32 |
| TraesCS3D01G215200.1 | Wheat | nucleus | 21.93 | 18.32 |
| EES01375 | Sorghum | plastid | 21.05 | 18.25 |
| TraesCS3B01G137000.1 | Wheat | cytosol | 28.07 | 18.18 |
| TraesCS3A01G117700.1 | Wheat | cytosol | 28.07 | 18.13 |
| PGSC0003DMT400037607 | Potato | nucleus | 30.7 | 17.81 |
| VIT_04s0008g04490.t01 | Wine grape | nucleus | 32.02 | 17.76 |
| TraesCS3D01G119500.1 | Wheat | cytosol | 27.63 | 17.65 |
| TraesCS3A01G212800.1 | Wheat | nucleus | 21.05 | 17.65 |
| Solyc08g067970.2.1 | Tomato | nucleus | 30.7 | 17.24 |
| Zm00001d008782_P001 | Maize | nucleus | 25.88 | 16.71 |
| EES00181 | Sorghum | cytosol, extracellular, nucleus | 20.61 | 16.55 |
| TraesCS3B01G243000.2 | Wheat | nucleus | 22.81 | 16.51 |
| GSMUA_Achr7P13270_001 | Banana | nucleus | 26.32 | 16.44 |
| Zm00001d039597_P001 | Maize | cytosol | 25.44 | 16.34 |
| KRH05019 | Soybean | nucleus | 27.63 | 15.79 |
| KRH16080 | Soybean | nucleus | 28.07 | 15.76 |
| KRH52543 | Soybean | nucleus | 27.63 | 14.93 |
| Bra003541.1-P | Field mustard | nucleus, plastid | 17.98 | 14.75 |
| Os05t0180500-01 | Rice | cytosol | 20.18 | 14.07 |
| OQU77551 | Sorghum | mitochondrion, plastid | 22.81 | 14.02 |
| KRH61879 | Soybean | extracellular | 27.19 | 14.0 |
| GSMUA_Achr7P09810_001 | Banana | mitochondrion | 23.68 | 13.01 |
| TraesCS1B01G139200.1 | Wheat | plastid | 20.61 | 12.84 |
| TraesCS1A01G119800.1 | Wheat | plastid | 21.93 | 12.66 |
| HORVU1Hr1G026780.1 | Barley | cytosol, extracellular, plastid | 19.74 | 12.53 |
| Bra040437.1-P | Field mustard | mitochondrion, plastid | 21.93 | 12.53 |
| TraesCS1D01G120700.1 | Wheat | cytosol, extracellular, plastid | 21.05 | 12.15 |
| HORVU3Hr1G021650.1 | Barley | nucleus | 23.25 | 12.05 |
| Zm00001d037713_P001 | Maize | cytosol | 16.23 | 11.28 |
| GSMUA_Achr10P... | Banana | cytosol, mitochondrion | 15.35 | 10.51 |
Protein Annotations
| EnsemblPlants:Bra023326.1 | EnsemblPlants:Bra023326.1-P | EnsemblPlantsGene:Bra023326 | InterPro:IPR007650 | InterPro:Zf-FLZ_dom | PANTHER:PTHR33059 |
| PANTHER:PTHR33059:SF15 | PFAM:PF04570 | PFscan:PS51795 | SEG:seg | UniParc:UPI0002543344 | UniProt:M4E3H4 |
| MapMan:27.3.3 | : | : | : | : | : |
Description
AT5G11460 (E=9e-033) | senescence-associated protein-related
Coordinates
chrA02:-:2847807..2848617
Molecular Weight (calculated)
25422.1 Da
IEP (calculated)
5.717
GRAVY (calculated)
-0.357
Length
228 amino acids
Sequence
(BLAST)
(BLAST)
001: MSQHPNNQMA SGSVFYLTKP ESSGLKNNTI SSCVSDYEAA WSPTSPLEFI LFPSLVNPFG GSSLSSIRKT HKKSWDSGKV GLSIVDSLDD DHHIESSRIL
101: LPSPDSKNII FESLLRTRNT FVNNNNNNNA CLESVDSKEM KRRCCGIKKE SIFVIAPLDL TTIADVLVLP PNDFLSSCFF CNKKLGMGKD IYMYRGYKAF
201: CSVECRLEVI YQDEKMEEEE AKSGSSSE
101: LPSPDSKNII FESLLRTRNT FVNNNNNNNA CLESVDSKEM KRRCCGIKKE SIFVIAPLDL TTIADVLVLP PNDFLSSCFF CNKKLGMGKD IYMYRGYKAF
201: CSVECRLEVI YQDEKMEEEE AKSGSSSE
001: MSQHSNYQMT TASDYYSTKP VLSAIRSHKL ISSVFEGKCP SDYESAWSPT SPLDFRLFST LGNPFAASSS RSIWRGKQRS WDSGKVGLSI VHSLVDDHHT
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
101: DSSATIVLPS PDSKNIIFGS LMRSGQKPHL LSQPFTKALM PKDVIPNAVF EIGHDVIDVL ELRKSGSVDA AYCSGAENFS VNNNACQVTK QDPGSLNGGT
201: ESDMEISEDY TCVISHGPNP KTTHFYGDQV MESVEREELK NRCCKNEKES IFAVAPLDLT TPVDVLPPKD FLSFCYGCSK KLGMGEDIYM YSGYKAFCSS
301: ECRSKEIDLD EEMEDGDEEE AIKSVSSSDK ESKKKSNGVF FTVG
Arabidopsis Description
At5g11460 [Source:UniProtKB/TrEMBL;Acc:Q9LYE4]
SUBAcon: [cytosol,plastid]
SUBAcon: [cytosol,plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.