Factsheet for GSMUA_AchrUn_randomP12070_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
plastid 2
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
GSMUA_Achr1P14130_001
GSMUA_Achr2P08850_001
GSMUA_Achr3P25470_001
GSMUA_Achr4P21250_001
GSMUA_Achr4P22610_001
GSMUA_Achr6P22030_001
GSMUA_Achr8P20380_001
GSMUA_Achr9P25720_001

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G08850.1	GSMUA_Achr1P14130_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr2P08850_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr3P25470_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr4P21250_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr4P22610_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr6P22030_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr8P20380_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr9P25720_001	AT3G22550.1	21798944
AT3G08850.1	GSMUA_Achr1P14130_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr2P08850_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr3P25470_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr4P21250_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr4P22610_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr6P22030_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr8P20380_001	AT3G63210.1	21798944
AT3G08850.1	GSMUA_Achr9P25720_001	AT3G63210.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P14390_001	Banana	cytosol	89.73	79.04
Os11t0109933-01	Rice	cytosol	76.04	76.6
PGSC0003DMT400043895	Potato	cytosol	77.02	70.16
Solyc09g014780.2.1	Tomato	nucleus	76.94	69.77
TraesCS5B01G147900.4	Wheat	plastid	76.94	69.21
TraesCS5A01G149200.2	Wheat	plastid	76.85	69.08
TraesCS5D01G143600.3	Wheat	plastid	76.77	69.06
Os12t0110000-01	Rice	cytosol, plastid	76.2	68.8
AT3G08850.1	Thale cress	cytosol	74.57	68.08
Zm00001d023230_P006	Maize	cytosol, plastid	74.9	67.62
OQU82706	Sorghum	cytosol, plastid	74.25	67.53
EES16504	Sorghum	plastid	74.65	66.96
CDY00652	Canola	plastid	73.02	65.98
Bra001342.1-P	Field mustard	plastid	72.78	65.76
CDY67456	Canola	plastid	72.7	65.68
Bra029726.1-P	Field mustard	cytosol	71.07	64.78
Zm00001d005063_P001	Maize	cytosol, plastid	61.94	63.97
CDY27967	Canola	cytosol	71.56	63.62
AT5G01770.1	Thale cress	cytosol	68.79	63.17
Zm00001d052327_P006	Maize	cytosol	70.33	62.22
CDY64943	Canola	cytosol	59.66	61.05
VIT_08s0058g00910.t01	Wine grape	cytosol, extracellular, nucleus	2.53	40.79
GSMUA_AchrUn_...	Banana	cytosol	2.12	12.32

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.130.10.10	MapMan:27.7.1.2	InterPro:ARM-like	InterPro:ARM-type_fold	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0031929	GO:GO:0031931	EnsemblPlantsGene:GSMUA_AchrUn_randomG12070_001
EnsemblPlants:GSMUA_AchrUn_randomP12070_001	EnsemblPlants:GSMUA_AchrUn_randomT12070_001	InterPro:IPR001680	InterPro:IPR011989	InterPro:IPR015943	InterPro:IPR017986
UniProt:M0U8G6	PFAM:PF00400	PFAM:PF14538	PRINTS:PR01547	PFscan:PS50294	PANTHER:PTHR12848
PANTHER:PTHR12848:SF16	InterPro:Raptor	InterPro:Raptor_N	SMART:SM00320	SMART:SM01302	SUPFAM:SSF48371
SUPFAM:SSF50978	UniParc:UPI000294FF84	InterPro:WD40/YVTN_repeat-like_dom_sf	InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf
SEG:seg	:	:	:	:	:

Description

Putative Regulatory-associated protein of mTOR [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG12070_001]

Coordinates

chrchrUn_random:-:57773191..57785992

Molecular Weight (calculated)

134767.0 Da

IEP (calculated)

6.954

GRAVY (calculated)

-0.070

Length

1227 amino acids

Sequence
(BLAST)

0001: MAAPKALETI GKALHAQYER WQPRARYKLQ LDPTVEEVKK LCNTCRKYAR SERVLFHYNG HGVPKPTANG EIWVFNKSYT QYIPLPISEL DSWLKTPSIY
0101: VFDCSAAGMI ISGFLERQEW NSSGATVSSS KDCILLAACE AHETLPQSAE FPADVFTSCL TTPIKMALRW FCSRSLLRGS LSYSLIDQIP GRQNDRKTLL
0201: GELNWIFTAV TDTIAWNVLP HDLFQRLFRQ DLLVASLFRN FLLAERIMRA ANCSPVSYPL LPPTHQHHMW DAWDMAAEIC LSKLPQLIAD PNAEFQPSPF
0301: FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQSHRFR ALVLLGRFLD MGPWAVDLAL SVGIFPYVLK LLQTTATELR QILVFIWTKI LALDKSCQVD
0401: LVKDGGHTYF IRFLDSMDAY PEQRAMAAFV LAVVVDGHRR GQEACIQANL IHVCLKHLQL ANPSDGQTEP LLLQWLCLCL GKLWEDFPEA QIIGLQADGP
0501: SIIVPLLMEP QPEVRAAAAF ALGTLIDVGT ITFGEGHGGV EDIDVDEKIK SELSIIRSLL QVAADGSPLV RAEVAVALAR FSFGHNKHLK SIAAEYWKPQ
0601: ANSLLSSLPS LASISNPSCY NPSQFIQVGS TISSNIGPVL RGSSDNTAGV RDGRISTSSP VTSTGVMLGS PLSDDSSHHS DSGILIKETA SNGVIDYPRA
0701: RPLDNAQYSQ FILAMCNMAK DPSPRVANVG RRALSIIGIE LVVAKAARFG AGGIHQGDSC APSHLSNLSG LARSSSWFDL NAGQLSMTFR TPPVSPPRQN
0801: YLTGLRRVCS LEFRPHQLSS PDTGLADPLL GASGSSGGSE RSLLPQSTIY NWSCGHFSRP LLAGADDSEE TIARREERER IALDRIAKCQ HSSNSKLGNQ
0901: IASWYTKFET GTKAALLLPF SPIVVAADEN ERIRIWNYEE ATPLNSFDNH DSSDRGISKL CLVNELDDSL LLVASSDGNV RFWKNYTVKG KQKLITAFSS
1001: VQGHRGAARG TNAVVDWQQQ SGYLYASGEI SSILLWDLDK EQLVSSIPSL SDSSISALSA SQVHGGQFAA GFVDGSIRIF DVRTPEMPVC TARPHTQRVE
1101: RVVGIGFQPG LDPTKIVSAS QAGDIQFLDI RNQTEPYLTI DAHRGSLTAL AIHRHAPIIA SGSAKQIVKV FSLRGEQLSI IRYYPTFMAQ RIGSVSCLTF
1201: HPYRVLLAAG AADACVSIYA DDSYQAR

Best Arabidopsis Sequence Match ( AT3G08850.1 )
(BLAST)

0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR

Arabidopsis Description

RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.