Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra001342.1-P | Field mustard | plastid | 93.53 | 92.56 |
| CDY00652 | Canola | plastid | 93.53 | 92.56 |
| CDY67456 | Canola | plastid | 93.45 | 92.49 |
| Bra029726.1-P | Field mustard | cytosol | 90.55 | 90.42 |
| CDY27967 | Canola | cytosol | 91.22 | 88.84 |
| CDY64943 | Canola | cytosol | 79.02 | 88.57 |
| AT5G01770.1 | Thale cress | cytosol | 80.65 | 81.14 |
| VIT_08s0058g00890.t01 | Wine grape | cytosol | 76.93 | 75.86 |
| PGSC0003DMT400043895 | Potato | cytosol | 75.0 | 74.83 |
| Solyc09g014780.2.1 | Tomato | nucleus | 75.22 | 74.72 |
| KRH00387 | Soybean | nucleus | 75.82 | 74.65 |
| GSMUA_AchrUn_... | Banana | cytosol | 68.08 | 74.57 |
| KRH40797 | Soybean | nucleus | 76.12 | 74.51 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 71.58 | 69.06 |
| Os11t0109933-01 | Rice | cytosol | 62.35 | 68.8 |
| Os12t0110000-01 | Rice | cytosol, plastid | 67.78 | 67.03 |
| TraesCS5D01G143600.3 | Wheat | plastid | 68.01 | 67.01 |
| TraesCS5B01G147900.4 | Wheat | plastid | 67.86 | 66.86 |
| TraesCS5A01G149200.2 | Wheat | plastid | 67.71 | 66.67 |
| OQU82706 | Sorghum | cytosol, plastid | 66.15 | 65.9 |
| EES16504 | Sorghum | plastid | 66.15 | 64.99 |
| KRH40804 | Soybean | cytosol | 6.47 | 63.5 |
| Zm00001d005064_P002 | Maize | plastid | 9.75 | 52.61 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.7 | 42.65 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | PDB:5WBI | PDB:5WBJ | PDB:5WBK |
| PDB:5WBL | EntrezGene:820032 | UniProt:A0A178V9S6 | ProteinID:AAF07837.1 | ProteinID:AEE74687.1 | InterPro:ARM-like |
| InterPro:ARM-type_fold | ArrayExpress:AT3G08850 | EnsemblPlantsGene:AT3G08850 | RefSeq:AT3G08850 | TAIR:AT3G08850 | RefSeq:AT3G08850-TAIR-G |
| EnsemblPlants:AT3G08850.1 | TAIR:AT3G08850.1 | EMBL:AY059838 | EMBL:AY769948 | Unigene:At.18622 | EMBL:BT008813 |
| GO:GO:0000003 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005319 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0006464 | GO:GO:0006810 |
| GO:GO:0006869 | GO:GO:0006950 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 | GO:GO:0008150 |
| GO:GO:0008152 | GO:GO:0008361 | GO:GO:0009056 | GO:GO:0009267 | GO:GO:0009605 | GO:GO:0009719 |
| GO:GO:0009790 | GO:GO:0009791 | GO:GO:0009793 | GO:GO:0009987 | GO:GO:0009991 | GO:GO:0010492 |
| GO:GO:0010506 | GO:GO:0016043 | GO:GO:0016049 | GO:GO:0019538 | GO:GO:0030307 | GO:GO:0030674 |
| GO:GO:0031929 | GO:GO:0031931 | GO:GO:0040007 | GO:GO:0040008 | GO:GO:0071230 | GO:GO:0071902 |
| GO:GO:0080008 | InterPro:IPR001680 | InterPro:IPR011989 | InterPro:IPR015943 | InterPro:IPR017986 | RefSeq:NP_566335.1 |
| ProteinID:OAP03070.1 | PFAM:PF14538 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000229 | PO:PO:0000230 |
| PO:PO:0000293 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009049 | PO:PO:0009052 | PO:PO:0020030 |
| PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR01547 |
| PFscan:PS50294 | PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 | UniProt:Q93YQ1 | Symbol:RAPTOR1B | InterPro:Raptor |
| InterPro:Raptor_N | SMART:SM00320 | SMART:SM01302 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI00000A813C |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
Coordinates
chr3:-:2686457..2695400
Molecular Weight (calculated)
147971.0 Da
IEP (calculated)
6.646
GRAVY (calculated)
-0.115
Length
1344 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.