Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- mitochondrion 1
- cytosol 2
- plastid 3
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT3G08850.1 | EER91113 | AT3G22550.1 | 21798944 |
| AT3G08850.1 | EER94230 | AT3G22550.1 | 21798944 |
| AT3G08850.1 | EER91113 | AT3G63210.1 | 21798944 |
| AT3G08850.1 | EER94230 | AT3G63210.1 | 21798944 |
| AT3G08850.1 | OQU77194 | AT5G61960.1 | 15720729 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES16504 | Sorghum | plastid | 89.99 | 88.74 |
| Zm00001d005063_P001 | Maize | cytosol, plastid | 77.46 | 87.96 |
| Os11t0109933-01 | Rice | cytosol | 77.76 | 86.12 |
| TraesCS5D01G143600.3 | Wheat | plastid | 86.29 | 85.34 |
| TraesCS5B01G147900.4 | Wheat | plastid | 86.06 | 85.12 |
| TraesCS5A01G149200.2 | Wheat | plastid | 86.06 | 85.05 |
| Os12t0110000-01 | Rice | cytosol, plastid | 84.58 | 83.96 |
| GSMUA_AchrUn_... | Banana | cytosol | 67.53 | 74.25 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 72.5 | 70.21 |
| Solyc09g014780.2.1 | Tomato | nucleus | 68.64 | 68.44 |
| PGSC0003DMT400043895 | Potato | cytosol | 68.2 | 68.3 |
| AT3G08850.1 | Thale cress | cytosol | 65.9 | 66.15 |
| CDY67456 | Canola | plastid | 65.46 | 65.02 |
| CDY00652 | Canola | plastid | 65.46 | 65.02 |
| Bra001342.1-P | Field mustard | plastid | 65.46 | 65.02 |
| Bra029726.1-P | Field mustard | cytosol | 64.12 | 64.26 |
| CDY27967 | Canola | cytosol | 64.49 | 63.04 |
| AT5G01770.1 | Thale cress | cytosol | 62.19 | 62.8 |
| CDY64943 | Canola | cytosol | 54.34 | 61.13 |
| KRG88726 | Soybean | extracellular | 2.74 | 48.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.75 | 43.13 |
| VIT_08s0058g00910.t01 | Wine grape | cytosol, extracellular, nucleus | 2.37 | 42.11 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | UniProt:A0A1B6PPJ4 | InterPro:ARM-like | InterPro:ARM-type_fold |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0031929 | GO:GO:0031931 |
| InterPro:IPR001680 | InterPro:IPR011989 | InterPro:IPR015943 | InterPro:IPR017986 | ProteinID:KXG27592.1 | EnsemblPlants:OQU82706 |
| ProteinID:OQU82706 | ProteinID:OQU82706.1 | PFAM:PF00400 | PFAM:PF14538 | PRINTS:PR01547 | PFscan:PS50294 |
| PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 | InterPro:Raptor | InterPro:Raptor_N | SMART:SM00320 | SMART:SM01302 |
| EnsemblPlantsGene:SORBI_3005G008800 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | UniParc:UPI00081AE924 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat |
| InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr5:-:663512..674463
Molecular Weight (calculated)
148624.0 Da
IEP (calculated)
6.730
GRAVY (calculated)
-0.161
Length
1349 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMASR LGHSSTSPSP SPAAAATPVP PLPHQQHQNH HNHVADDLPV ANGPEPRNGL EVAEVEKPAP VAYLPQVVVL CEQRHQGIDE ATAAAAAPST
0101: SGLVSKWRPK DRMKTGCVAL VLCLNISVDP PDVIKISPCA RMECWIDPFS MLAPKALESI GKTLHSQYER WQPKARYKLQ LDPTVEEVKK LCNTCRKYAR
0201: SERVLFHYNG HGVPKPTSNG EIWVFNKSYT QYIPLPITDL DSWLKTPSIY VFDCSAAGII VKAFLERLDW SSTSSASSQK DCILLAACEA HQMLPQSAEF
0301: PADVFTACLT TPIKMALHWF CKRTLLHGSL DHSLIDQIPG RQNDRKTLLG ELNWIFTAIT DTIAWNVLPH GLFQRLFRQD LLVASLFRNF LLAERIMRSA
0401: NCSPVSYPML PPTHQHHMWD AWDMAAEICL SKLPQLIADP NAEFQPSPFF TEQLMAFEVW LDHGSEDKKP PEQLPIVLQV LLSQSHRFRA LVLLGRFLDM
0501: GPWAVDLALS VGIFPYVLKL LQTSAMELRQ ILVFIWTKIL SLDKSCQVDL VKDGGHGYFI RFLDSLDAFP EQRAMAAFVI AVIVDGHRTG QEACMNAGLI
0601: DVCLRHLQPE NPHAQTEPLL LQWLCLCLGK VWEDFPEAQL HGLQTNAPEI VICLLSEPQP EVRAAAVFAL GNLLDNTLNG SDDDSDDDEK VKAEINVVRS
0701: LLQMSSDGSP LVRSEVAIAL TRFASGHNKH LKSVAAEYWK PQSNSLLKSL PSLANISNPS NVYSPNNSIG PVLRVGSDSG AAGRDGRIST SSPIATSSIM
0801: HGSPQSDDSS QHSDSGLLLR ENASNGGLSY TAPRPVDNVI YSQFISTMCS ISKDPDPRIA TIGRRALSLI DVEQVVMKNT RFNSGGPHRV ETSASNYGMA
0901: RSSSWRDMNS GSISMKFMTP PVSPPQHDYL IGLRRVCSME FGQHPINSPD GLADRLLSSA AGLSNREPLP QSTIYNWSCG HFSRPLLTVS DDNEETNARR
1001: EEKERIALDY ITKCQRSSAC KMTSQIASWD TRFELGTKAA LLLPFSPIVV AADESEQIRV WNYDDALPVN SFQNHKLSDR GLSKLLLINE LDESLLLAAS
1101: SDGNVRIWKN FAQKGGQKLV TAFSSVQGHR AAGRSIVIDW QQQSGYLYAS GDMSSILVWD LDKEQLLSTI QSTADNAISS LSASLVRSGH FAAGFADGSV
1201: RIYDVRSPDR LVYVARPHAP RTEKVVGIGF QPGFDPYKIV SASQAGDIQF LDVRRAAEPY LTIEAHRGSL TALAVHRHAP VVASGSAKQM IKVFSLEGEQ
1301: LTIIRYQPSF MGQRIGSVNC LSFHPYKSLL AAGAGDNALV SIYAEENYK
0101: SGLVSKWRPK DRMKTGCVAL VLCLNISVDP PDVIKISPCA RMECWIDPFS MLAPKALESI GKTLHSQYER WQPKARYKLQ LDPTVEEVKK LCNTCRKYAR
0201: SERVLFHYNG HGVPKPTSNG EIWVFNKSYT QYIPLPITDL DSWLKTPSIY VFDCSAAGII VKAFLERLDW SSTSSASSQK DCILLAACEA HQMLPQSAEF
0301: PADVFTACLT TPIKMALHWF CKRTLLHGSL DHSLIDQIPG RQNDRKTLLG ELNWIFTAIT DTIAWNVLPH GLFQRLFRQD LLVASLFRNF LLAERIMRSA
0401: NCSPVSYPML PPTHQHHMWD AWDMAAEICL SKLPQLIADP NAEFQPSPFF TEQLMAFEVW LDHGSEDKKP PEQLPIVLQV LLSQSHRFRA LVLLGRFLDM
0501: GPWAVDLALS VGIFPYVLKL LQTSAMELRQ ILVFIWTKIL SLDKSCQVDL VKDGGHGYFI RFLDSLDAFP EQRAMAAFVI AVIVDGHRTG QEACMNAGLI
0601: DVCLRHLQPE NPHAQTEPLL LQWLCLCLGK VWEDFPEAQL HGLQTNAPEI VICLLSEPQP EVRAAAVFAL GNLLDNTLNG SDDDSDDDEK VKAEINVVRS
0701: LLQMSSDGSP LVRSEVAIAL TRFASGHNKH LKSVAAEYWK PQSNSLLKSL PSLANISNPS NVYSPNNSIG PVLRVGSDSG AAGRDGRIST SSPIATSSIM
0801: HGSPQSDDSS QHSDSGLLLR ENASNGGLSY TAPRPVDNVI YSQFISTMCS ISKDPDPRIA TIGRRALSLI DVEQVVMKNT RFNSGGPHRV ETSASNYGMA
0901: RSSSWRDMNS GSISMKFMTP PVSPPQHDYL IGLRRVCSME FGQHPINSPD GLADRLLSSA AGLSNREPLP QSTIYNWSCG HFSRPLLTVS DDNEETNARR
1001: EEKERIALDY ITKCQRSSAC KMTSQIASWD TRFELGTKAA LLLPFSPIVV AADESEQIRV WNYDDALPVN SFQNHKLSDR GLSKLLLINE LDESLLLAAS
1101: SDGNVRIWKN FAQKGGQKLV TAFSSVQGHR AAGRSIVIDW QQQSGYLYAS GDMSSILVWD LDKEQLLSTI QSTADNAISS LSASLVRSGH FAAGFADGSV
1201: RIYDVRSPDR LVYVARPHAP RTEKVVGIGF QPGFDPYKIV SASQAGDIQF LDVRRAAEPY LTIEAHRGSL TALAVHRHAP VVASGSAKQM IKVFSLEGEQ
1301: LTIIRYQPSF MGQRIGSVNC LSFHPYKSLL AAGAGDNALV SIYAEENYK
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.