Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G147900.4 | Wheat | plastid | 99.05 | 99.05 |
| TraesCS5A01G149200.2 | Wheat | plastid | 98.97 | 98.9 |
| Os11t0109933-01 | Rice | cytosol | 81.74 | 91.54 |
| Os12t0110000-01 | Rice | cytosol, plastid | 89.52 | 89.85 |
| OQU82706 | Sorghum | cytosol, plastid | 85.34 | 86.29 |
| EES16504 | Sorghum | plastid | 86.14 | 85.89 |
| Zm00001d023230_P006 | Maize | cytosol, plastid | 83.87 | 84.18 |
| Zm00001d005063_P001 | Maize | cytosol, plastid | 71.26 | 81.82 |
| Zm00001d052327_P006 | Maize | cytosol | 80.65 | 79.31 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.06 | 76.77 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 74.27 | 72.72 |
| Solyc09g014780.2.1 | Tomato | nucleus | 69.79 | 70.36 |
| PGSC0003DMT400043895 | Potato | cytosol | 69.35 | 70.23 |
| AT3G08850.1 | Thale cress | cytosol | 67.01 | 68.01 |
| CDY00652 | Canola | plastid | 66.42 | 66.72 |
| CDY67456 | Canola | plastid | 66.28 | 66.57 |
| Bra001342.1-P | Field mustard | plastid | 66.28 | 66.57 |
| Bra029726.1-P | Field mustard | cytosol | 64.96 | 65.82 |
| CDY27967 | Canola | cytosol | 65.4 | 64.64 |
| AT5G01770.1 | Thale cress | cytosol | 62.61 | 63.92 |
| CDY64943 | Canola | cytosol | 55.21 | 62.8 |
| KRG88726 | Soybean | extracellular | 2.71 | 48.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 6.96 | 45.02 |
| VIT_08s0058g00910.t01 | Wine grape | cytosol, extracellular, nucleus | 2.27 | 40.79 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | InterPro:ARM-like | InterPro:ARM-type_fold | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0031929 | GO:GO:0031931 | InterPro:IPR001680 |
| InterPro:IPR011989 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF14538 | PRINTS:PR01547 |
| PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 | InterPro:Raptor | InterPro:Raptor_N |
| SMART:SM00320 | SMART:SM01302 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS5D01G143600 | EnsemblPlants:TraesCS5D01G143600.3 |
| InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg | : |
Description
No Description!
Coordinates
chr5D:-:229353848..229364028
Molecular Weight (calculated)
149791.0 Da
IEP (calculated)
6.393
GRAVY (calculated)
-0.129
Length
1364 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMASR LVHSSSSSSS SSLPTPSSAA VNHQTDRVDG ELPVANGPEL RREDAGEEDE EGRAVVLVPC LPQVVVLCEQ RHEGFDEAAA AVAGPSTSGL
0101: VSKWRPKDRM KTGCVALVLC LNISVDPPDV IKISPCARME CWIDPFSMPP PKALESIGKT LHSQYERWQP KARYKLQLDP TVEEVKKLCN TCRKYARSER
0201: VLFHYNGHGV PKPTANGEIW VFNKSYTQYI PLPITDLDSW LKTPSIYVFD CSAAGMIVKA FLERLDWSSS SSASSVKDCI LLAACEAHQT LPQSAEYPAD
0301: VFTACLTTPI KMALHWFCKR SLLSGSLDHS LIDQIPGRQN DRKTLLGELN WIFTAITDTI AWNVLPHELF QRLFRQDLLV ASLFRNFLLA ERIMRSANCS
0401: PITYPLLPPT HQHHMWDAWD MAAEICLSKL PHLIADPNAE FQPSPFFTEQ LTAFEVWLDH GSEDKKPPEQ LPIVLQVLLS QSHRFRALVL LGRFLDMGPW
0501: AVDLALSVGI FPYVLKLLQT SAMELRQILV FIWTKILSLD KSCQVDLVKD GGHAYFIRFL DSLDAYPEQR AMAAFVLAVI VDGHRRGQEA CMSAGLIDVC
0601: LRHLQPENPH DAQTEPLLLQ WLCLCLGKLW EDFPEAQLLG LQSNAPEIVT CLLSEPQPEV RASAVFALGN LLDIGSPSVN GGDDDSDDDE KVRAEINVVR
0701: SLLQVTSDGS PLVRAEVSVA LTRFALGHNK HLKSVAAEYW RPQTNSLLKS LPSLANINNP SNVYSPSNFL QGSSGLSSHI GPVLRVGSDT SAAGRDGRIS
0801: TSSPIATNSI MHGSPQSDDS SQHSDSGILL RDNASNGGLS YTRSRPIIDS GIYSLFISTM CSIAKDPYPR IANIGRRALS LVGVEQVVMR NTRFGSGGAG
0901: ETSAPSSNIG MARSSSWFDM NSGISMAFRT PPVSPPQHDY LTGLRRVCSM EFRPHLLNSP DGLADPLLSS AAAPSTSELN ILPQSTIYNW SCGHFSRPLL
1001: TGSDDNGEVT ARREERERTA LDCIAKCQRS SACKMTSQIA SWDTKFELGT KSALLLPFSP IVVAADENEQ IRVWNYDDAL PVNTFENHKL SDRGLSKLLL
1101: INELDESLLL VGSSDGNVRI WRNYAQKGGQ KLVTAFSSVQ GHRAAGRSVV IDWQQQSGYL YASGDMSSIL VWDLDKEQLL NTIPSSADSG ISALSASQVR
1201: PGQFAAGFID ASVRIFDVRT PDRLVYMARP HAPRTEKVVG IGFQPGFDPY KIVSASQAGD IQFLDVRRAA EPYLTIEAHR GSLTALAVHR HAPVIASGSA
1301: KQMIKVFSLE GEQLTIIRYQ PSFMGQRIGS VNCLSFHPYK SLLAAGAGDN ALVSIYAEDN YQVR
0101: VSKWRPKDRM KTGCVALVLC LNISVDPPDV IKISPCARME CWIDPFSMPP PKALESIGKT LHSQYERWQP KARYKLQLDP TVEEVKKLCN TCRKYARSER
0201: VLFHYNGHGV PKPTANGEIW VFNKSYTQYI PLPITDLDSW LKTPSIYVFD CSAAGMIVKA FLERLDWSSS SSASSVKDCI LLAACEAHQT LPQSAEYPAD
0301: VFTACLTTPI KMALHWFCKR SLLSGSLDHS LIDQIPGRQN DRKTLLGELN WIFTAITDTI AWNVLPHELF QRLFRQDLLV ASLFRNFLLA ERIMRSANCS
0401: PITYPLLPPT HQHHMWDAWD MAAEICLSKL PHLIADPNAE FQPSPFFTEQ LTAFEVWLDH GSEDKKPPEQ LPIVLQVLLS QSHRFRALVL LGRFLDMGPW
0501: AVDLALSVGI FPYVLKLLQT SAMELRQILV FIWTKILSLD KSCQVDLVKD GGHAYFIRFL DSLDAYPEQR AMAAFVLAVI VDGHRRGQEA CMSAGLIDVC
0601: LRHLQPENPH DAQTEPLLLQ WLCLCLGKLW EDFPEAQLLG LQSNAPEIVT CLLSEPQPEV RASAVFALGN LLDIGSPSVN GGDDDSDDDE KVRAEINVVR
0701: SLLQVTSDGS PLVRAEVSVA LTRFALGHNK HLKSVAAEYW RPQTNSLLKS LPSLANINNP SNVYSPSNFL QGSSGLSSHI GPVLRVGSDT SAAGRDGRIS
0801: TSSPIATNSI MHGSPQSDDS SQHSDSGILL RDNASNGGLS YTRSRPIIDS GIYSLFISTM CSIAKDPYPR IANIGRRALS LVGVEQVVMR NTRFGSGGAG
0901: ETSAPSSNIG MARSSSWFDM NSGISMAFRT PPVSPPQHDY LTGLRRVCSM EFRPHLLNSP DGLADPLLSS AAAPSTSELN ILPQSTIYNW SCGHFSRPLL
1001: TGSDDNGEVT ARREERERTA LDCIAKCQRS SACKMTSQIA SWDTKFELGT KSALLLPFSP IVVAADENEQ IRVWNYDDAL PVNTFENHKL SDRGLSKLLL
1101: INELDESLLL VGSSDGNVRI WRNYAQKGGQ KLVTAFSSVQ GHRAAGRSVV IDWQQQSGYL YASGDMSSIL VWDLDKEQLL NTIPSSADSG ISALSASQVR
1201: PGQFAAGFID ASVRIFDVRT PDRLVYMARP HAPRTEKVVG IGFQPGFDPY KIVSASQAGD IQFLDVRRAA EPYLTIEAHR GSLTALAVHR HAPVIASGSA
1301: KQMIKVFSLE GEQLTIIRYQ PSFMGQRIGS VNCLSFHPYK SLLAAGAGDN ALVSIYAEDN YQVR
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.