Factsheet for Zm00001d052327_P006

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 3
cytosol 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0109933-01	Rice	cytosol	72.24	82.27
Zm00001d005063_P001	Maize	cytosol, plastid	69.21	80.81
TraesCS5D01G143600.3	Wheat	plastid	79.31	80.65
TraesCS5B01G147900.4	Wheat	plastid	79.24	80.57
Zm00001d023230_P006	Maize	cytosol, plastid	78.8	80.43
TraesCS5A01G149200.2	Wheat	plastid	79.09	80.37
Os12t0110000-01	Rice	cytosol, plastid	77.65	79.25
GSMUA_AchrUn_...	Banana	cytosol	62.22	70.33
GSMUA_Achr5P14390_001	Banana	cytosol	67.05	66.76
Zm00001d005064_P002	Maize	plastid	11.82	65.86
KRG88726	Soybean	extracellular	2.67	48.68
GSMUA_AchrUn_...	Banana	cytosol	6.27	41.23
VIT_08s0058g00910.t01	Wine grape	cytosol, extracellular, nucleus	2.24	40.79

Protein Annotations

Gene3D:1.25.10.10	Gene3D:2.130.10.10	MapMan:27.7.1.2	UniProt:A0A1D6QGB0	ProteinID:AQK56960.1	InterPro:ARM-like
InterPro:ARM-type_fold	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009987	GO:GO:0031929
GO:GO:0031931	InterPro:IPR001680	InterPro:IPR011989	InterPro:IPR015943	InterPro:IPR017986	PFAM:PF14538
PRINTS:PR01547	PFscan:PS50294	PANTHER:PTHR12848	PANTHER:PTHR12848:SF16	InterPro:Raptor	InterPro:Raptor_N
SMART:SM00320	SMART:SM01302	SUPFAM:SSF48371	SUPFAM:SSF50978	UniParc:UPI00084252B0	InterPro:WD40/YVTN_repeat-like_dom_sf
InterPro:WD40_repeat	InterPro:WD40_repeat_dom	InterPro:WD40_repeat_dom_sf	EnsemblPlantsGene:Zm00001d052327	EnsemblPlants:Zm00001d052327_P006	EnsemblPlants:Zm00001d052327_T006
SEG:seg	:	:	:	:	:

Description

Regulatory-associated protein of TOR 1

Coordinates

chr4:-:187152491..187165484

Molecular Weight (calculated)

152659.0 Da

IEP (calculated)

6.541

GRAVY (calculated)

-0.069

Length

1387 amino acids

Sequence
(BLAST)

0001: MMTAGGSEAQ QASMALGDPM TFRLGHSSSS PSSAAAPVPP LPHHHHSHQN HIADDLPVAN GPEPRNELEV AEVEKPAPAA YLSQVVVLCD QRHEGIDEAT
0101: AAASAASTSG LVSKWRPKER MKTGCVALVL CLNISVDPPD VIKISPCARL ECWIVGLCYV HRPIPSFSDP FSMTPLKALE SIGKTLHSQL DTSFSWIQQW
0201: KMLRIFVILA ANMLDQRVLF HYNGHGVPKP TSNGEIWVFN KSYTQYIPLP ITDLDSWLKA PSIYVFDCSA AGIIVKAFLE RLDWSSTSSA SSQKDCILLA
0301: ACEAHQTLPQ SAEFPADVFT ACLTTPIKMA LHWFSLSPFL SLCVPVYWFC KRTLLCGSLD HSLIDKIPGR QNDRKTILGE LNWIFTAITD TIAWNVLPRD
0401: VFQRLFRQDL LVASLFRNFL LAERIMRSAN CSPVSYPLLP PTHQHHMWDA WDMAAEICLS KLPQLIDDPN AEFQPSPFFT EQLTAFEVWL DHGSEDKKPP
0501: EQLPIVLQVL LSQSHRFRAL VLLGRFLDMG PWAVDLALSV GIFPYVLKLL PTNTIELRQI LVFIWTKILS LDKSCQVDLV KDGGHTYFIR FLDSLDAFPE
0601: QRAMAAFVIA VIVDGHRMGQ EACMNAGLID VCLRHLQPEN LHAQTEPLLL QWLCLCLGKL WEDFPEAQLL GLQTNAPETV ICLLSEPRPE VRAAAVFALG
0701: NLTTLSNCPD DDSDDDEKVK AEINVVRSLL QISSDGSPLV RSEVAIALTH FALGHNKNLK SVAAEYWKPQ SKSLLKSLPS LANINNPSNV YSPNNILQGS
0801: IGPVLRVGSD SGAAGRDGHI STSSPIAASS IMHGSPQSDD SSQHSDSGIL LRENASNGGL SYTRSRPVDN VIYSQFISTM CSVSKDPDPR IATIGWRALT
0901: LIGVEQVAMK STRFNSGGLH RGETSASTFG MAHSSSWRDM NSGSNSMKFM TPPVSPPQHD YLLLGLRRVC SMEFGQHPIN SPDGFANLLL SSATGPSNAE
1001: LKKLPESTIY NWSCGHFSRP LLTASDDNEE TNARREERER IALDFITKCQ RSSACKITSQ IASWDTRFEL GTKAALLLPF SPIVVAADEN EKISVWNYDD
1101: AQPVNSFHNH KLSDRGLSKL LLINELDECL LLAASSDGNV RIWKNFACKG GQKLVTAFSS VQGHRAAGRS IVIDWQQQSC YLYASGDMSS ILVWDLDKEQ
1201: LLNTIPSSAD SAISALSASQ VRSGYFAAGF ADGSVRIYDV CSPDRQVHRP VYVARPHAPR TEKVVGIGFQ PGFDPYEIVS ASQAGDIQFL DVRMAAEPYL
1301: TIEAHRGSLT ALAVHRHAPV VASSAKQMIK VFSLEGEQLR IIRYLPSFMG QRTGSVNCLS FHPYKSLLAA GAGHNALVSI YAEENYK

Best Arabidopsis Sequence Match ( AT3G08850.1 )
(BLAST)

0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR

Arabidopsis Description

RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.