Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 5
- mitochondrion 1
- cytosol 2
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G147900.4 | Wheat | plastid | 99.05 | 99.12 |
| TraesCS5D01G143600.3 | Wheat | plastid | 98.9 | 98.97 |
| Os11t0109933-01 | Rice | cytosol | 81.54 | 91.38 |
| Os12t0110000-01 | Rice | cytosol, plastid | 89.23 | 89.62 |
| OQU82706 | Sorghum | cytosol, plastid | 85.05 | 86.06 |
| EES16504 | Sorghum | plastid | 85.79 | 85.6 |
| Zm00001d023230_P006 | Maize | cytosol, plastid | 83.59 | 83.96 |
| Zm00001d005063_P001 | Maize | cytosol, plastid | 70.99 | 81.57 |
| Zm00001d052327_P006 | Maize | cytosol | 80.37 | 79.09 |
| GSMUA_AchrUn_... | Banana | cytosol | 69.08 | 76.85 |
| GSMUA_Achr5P14390_001 | Banana | cytosol | 74.29 | 72.79 |
| Solyc09g014780.2.1 | Tomato | nucleus | 69.74 | 70.36 |
| PGSC0003DMT400043895 | Potato | cytosol | 69.3 | 70.23 |
| AT3G08850.1 | Thale cress | cytosol | 66.67 | 67.71 |
| CDY00652 | Canola | plastid | 66.08 | 66.42 |
| CDY67456 | Canola | plastid | 65.93 | 66.27 |
| Bra001342.1-P | Field mustard | plastid | 65.93 | 66.27 |
| Bra029726.1-P | Field mustard | cytosol | 64.91 | 65.82 |
| CDY27967 | Canola | cytosol | 65.2 | 64.49 |
| AT5G01770.1 | Thale cress | cytosol | 62.34 | 63.7 |
| CDY64943 | Canola | cytosol | 55.02 | 62.64 |
| KRG88726 | Soybean | extracellular | 2.71 | 48.68 |
| GSMUA_AchrUn_... | Banana | cytosol | 7.03 | 45.5 |
| VIT_08s0058g00910.t01 | Wine grape | cytosol, extracellular, nucleus | 2.27 | 40.79 |
Protein Annotations
| Gene3D:1.25.10.10 | Gene3D:2.130.10.10 | MapMan:27.7.1.2 | InterPro:ARM-like | InterPro:ARM-type_fold | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009987 | GO:GO:0031929 | GO:GO:0031931 |
| InterPro:IPR001680 | InterPro:IPR011989 | InterPro:IPR015943 | InterPro:IPR017986 | PFAM:PF00400 | PFAM:PF14538 |
| PRINTS:PR01547 | PFscan:PS50082 | PFscan:PS50294 | PANTHER:PTHR12848 | PANTHER:PTHR12848:SF16 | InterPro:Raptor |
| InterPro:Raptor_N | SMART:SM00320 | SMART:SM01302 | SUPFAM:SSF48371 | SUPFAM:SSF50978 | EnsemblPlantsGene:TraesCS5A01G149200 |
| EnsemblPlants:TraesCS5A01G149200.2 | InterPro:WD40/YVTN_repeat-like_dom_sf | InterPro:WD40_repeat | InterPro:WD40_repeat_dom | InterPro:WD40_repeat_dom_sf | SEG:seg |
Description
No Description!
Coordinates
chr5A:+:327081091..327091248
Molecular Weight (calculated)
149898.0 Da
IEP (calculated)
6.439
GRAVY (calculated)
-0.136
Length
1365 amino acids
Sequence
(BLAST)
(BLAST)
0001: MALGDLMASR LVHSSSSSSS SSLPTPSLAA VNHQTDRVDG ELPVANGPEL RREDAGEEDE EGRAVALVPC LPQVVVLCEQ RHEGFNEAAV AAAAGPSTSG
0101: LVSKWRPKDR MKTGCVALVL CLNISVDPPD VIKISPCARM ECWIDPFSMP PPKALENIGK TLHSQYERWQ PKARYKLQLD PTVEEVKKLC NTCRKYARSE
0201: RVLFHYNGHG VPKPTANGEI WMFNKSYTQY IPLPITDLDS WLKTPSIYVF DCSAAGMIVK AFLERLDWSS SSSASSVKDC ILLAACEAHQ TLPQSAEYPA
0301: DVFTACLTTP IKMALHWFCK RSLLSGSLDH SLIDQIPGRQ NDRKTLLGEL NWIFTAITDT IAWNVLPHEL FQRLFRQDLL VASLFRNFLL AERIMRSANC
0401: SPITYPLLPP THQHHMWDAW DMAAEICLSK LPHLIADPNA EFQPSPFFTE QLTAFEVWLD HGSEDKKPPE QLPIVLQVLL SQSHRFRALV LLGRFLDMGP
0501: WAVDLALSVG IFPYVLKLLQ TSAMELRQIL VFIWTKILSL DKSCQVDLVK DGGHAYFIRF LDSLDAYPEQ RAMAAFVLAV IVDGHRRGQE ACMSAGLIDV
0601: CLRHLQPENP HDAQTEPLLL QWLCLCLGKL WEDFPEAQLL GLQSNAPEIV TCLLSEPQPE VRASAVFALG NLLDIGSPSV NGGDDDSDDD EKARAEINVV
0701: RSLLQVTSDG SPLVRAEVSV ALTRFALGHN KHLKSVAAEY WRPQTNSLLK SLPSLANINN PSNVYSPSNF LQGSSGLSSH IGPVLRVGSD TSATGRDGRI
0801: STSSPIATNS IMHGSPQSDD SSQHSDSGIL LRDNASNGGL SYTRSRPIID SGIYSLFIST MCSIAKDPYP RIANIGRRAL SLVGVEQVVM RNTRFGSGGA
0901: GESSAPSSNI GMARSSSWFD MNSGISMAFR TPPVSPPQHD YLTGLRRVCS MEFRPHLLNS PDGLADPLLS SAAGPSTSEL NILPQSTIYN WSCGHFSRPL
1001: LTGSDDNGEV SARREERERT ALDCIAKCQR SSACKMTSQI ASWDTKFELG TKSALLLPFS PIVVAADENE QIRVWNYDDA LPVNTFENHK LSDRGLSKLL
1101: LINELDESLL LVGSSDGNVR IWRNYTQKGG QKLVTAFSSV QGHRAAGRSV VIDWQQQSGY LYASGDMSSI LVWDLDKEQL LNTIPSSADS GISALSASQV
1201: RSGQFAAGFI DASVRIFDVR TPDRLVYMAR PHAPRTEKVV GIGFQPGFDP YKIVSASQAG DIQFLDVRRA AEPYLTIEAH RGSLTALAVH RHAPVIASGS
1301: AKQMIKVFSL EGEQLTIIRY QPSFMGQRIG SVNCLSFHPY KSLLAAGAGD NALVSIYAED NYQVR
0101: LVSKWRPKDR MKTGCVALVL CLNISVDPPD VIKISPCARM ECWIDPFSMP PPKALENIGK TLHSQYERWQ PKARYKLQLD PTVEEVKKLC NTCRKYARSE
0201: RVLFHYNGHG VPKPTANGEI WMFNKSYTQY IPLPITDLDS WLKTPSIYVF DCSAAGMIVK AFLERLDWSS SSSASSVKDC ILLAACEAHQ TLPQSAEYPA
0301: DVFTACLTTP IKMALHWFCK RSLLSGSLDH SLIDQIPGRQ NDRKTLLGEL NWIFTAITDT IAWNVLPHEL FQRLFRQDLL VASLFRNFLL AERIMRSANC
0401: SPITYPLLPP THQHHMWDAW DMAAEICLSK LPHLIADPNA EFQPSPFFTE QLTAFEVWLD HGSEDKKPPE QLPIVLQVLL SQSHRFRALV LLGRFLDMGP
0501: WAVDLALSVG IFPYVLKLLQ TSAMELRQIL VFIWTKILSL DKSCQVDLVK DGGHAYFIRF LDSLDAYPEQ RAMAAFVLAV IVDGHRRGQE ACMSAGLIDV
0601: CLRHLQPENP HDAQTEPLLL QWLCLCLGKL WEDFPEAQLL GLQSNAPEIV TCLLSEPQPE VRASAVFALG NLLDIGSPSV NGGDDDSDDD EKARAEINVV
0701: RSLLQVTSDG SPLVRAEVSV ALTRFALGHN KHLKSVAAEY WRPQTNSLLK SLPSLANINN PSNVYSPSNF LQGSSGLSSH IGPVLRVGSD TSATGRDGRI
0801: STSSPIATNS IMHGSPQSDD SSQHSDSGIL LRDNASNGGL SYTRSRPIID SGIYSLFIST MCSIAKDPYP RIANIGRRAL SLVGVEQVVM RNTRFGSGGA
0901: GESSAPSSNI GMARSSSWFD MNSGISMAFR TPPVSPPQHD YLTGLRRVCS MEFRPHLLNS PDGLADPLLS SAAGPSTSEL NILPQSTIYN WSCGHFSRPL
1001: LTGSDDNGEV SARREERERT ALDCIAKCQR SSACKMTSQI ASWDTKFELG TKSALLLPFS PIVVAADENE QIRVWNYDDA LPVNTFENHK LSDRGLSKLL
1101: LINELDESLL LVGSSDGNVR IWRNYTQKGG QKLVTAFSSV QGHRAAGRSV VIDWQQQSGY LYASGDMSSI LVWDLDKEQL LNTIPSSADS GISALSASQV
1201: RSGQFAAGFI DASVRIFDVR TPDRLVYMAR PHAPRTEKVV GIGFQPGFDP YKIVSASQAG DIQFLDVRRA AEPYLTIEAH RGSLTALAVH RHAPVIASGS
1301: AKQMIKVFSL EGEQLTIIRY QPSFMGQRIG SVNCLSFHPY KSLLAAGAGD NALVSIYAED NYQVR
0001: MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
0101: KERMKTGCVA LVLCLNITVD PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR KLCLTCRKYA KTERVLFHYN
0201: GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL
0301: TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM
0401: LPPTHQHHMW DAWDMAAEIC LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR ALVLLGRFLD MGSWAVDLAL
0501: SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA
0601: SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV
0701: VSDGSPLVRA EVAVALARFA FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR ESRISSSPLG SSGLMQGSPL
0801: SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD
0901: MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL
1001: EHIAKCQHSS ISKLNNNPIA NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL INELDDSLLL VASCDGSVRI
1101: WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV
1201: RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY
1301: YPSFMAQKIG SVSCLTFHPY QVLLAAGAAD SFVSIYTHDN SQAR
Arabidopsis Description
RAPTOR1RAPTOR1B [Source:UniProtKB/TrEMBL;Acc:A0A178V9S6]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.