Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 7
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d046270_P001 | Maize | plastid | 100.0 | 100.0 |
| Zm00001d044708_P001 | Maize | cytosol, extracellular, plastid | 56.93 | 52.0 |
| Zm00001d026477_P002 | Maize | nucleus | 55.47 | 33.04 |
| Zm00001d033972_P002 | Maize | cytosol, extracellular, plastid | 40.15 | 31.79 |
| Zm00001d002029_P003 | Maize | nucleus | 39.42 | 25.0 |
| GSMUA_Achr8P24590_001 | Banana | nucleus | 31.39 | 18.86 |
| Os04t0653000-01 | Rice | cytosol, nucleus, plastid | 28.47 | 18.06 |
| CDY16574 | Canola | cytoskeleton, cytosol, nucleus | 25.55 | 17.59 |
| AT5G20900.1 | Thale cress | cytosol | 23.36 | 17.11 |
| CDX92427 | Canola | cytosol | 24.82 | 16.92 |
| GSMUA_Achr4P09660_001 | Banana | cytosol | 27.01 | 16.89 |
| Bra002338.1-P | Field mustard | cytosol | 24.09 | 16.42 |
| KRH37606 | Soybean | cytosol, nucleus, plastid | 23.36 | 15.53 |
| KRH12644 | Soybean | nucleus | 22.63 | 15.42 |
| KRH19420 | Soybean | nucleus | 21.9 | 14.49 |
| Zm00001d020614_P001 | Maize | cytosol, plastid | 21.9 | 13.76 |
| CDY09086 | Canola | cytosol | 21.9 | 13.57 |
| Bra020135.1-P | Field mustard | cytosol | 21.9 | 13.57 |
| KRH02523 | Soybean | cytosol | 18.98 | 13.2 |
| Zm00001d029448_P001 | Maize | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole | 21.9 | 13.16 |
| Zm00001d013855_P002 | Maize | plastid | 20.44 | 12.23 |
| AT3G43440.1 | Thale cress | cytosol | 21.17 | 12.18 |
| Zm00001d022139_P001 | Maize | plastid | 20.44 | 12.02 |
| Zm00001d005813_P002 | Maize | cytosol, plastid | 19.71 | 11.89 |
| Zm00001d006860_P001 | Maize | plastid | 18.98 | 9.77 |
Protein Annotations
| EnsemblPlants:Zm00001d021924_P001 | EnsemblPlants:Zm00001d021924_T001 | EnsemblPlantsGene:Zm00001d021924 | InterPro:CCT_CS | PANTHER:PTHR33077 | PANTHER:PTHR33077:SF5 |
| PFAM:PF09425 | ProteinID:AQL04012.1 | ProteinID:ONM59072.1 | SEG:seg | UniParc:UPI0008432EBF | UniProt:A0A1D6IHV8 |
| MapMan:35.1 | : | : | : | : | : |
Description
Protein TIFY 3B
Coordinates
chr7:+:165961049..165962395
Molecular Weight (calculated)
14162.0 Da
IEP (calculated)
10.803
GRAVY (calculated)
-0.045
Length
137 amino acids
Sequence
(BLAST)
(BLAST)
001: MLIAAAAAAA AATKGSAATA FNPPMVHTAT VAPAAVFSPV LTRSPSLQST SVAAGQAQVV ADPSSISKLQ ADLPIARRHS LQRFLEKRRD RVVSKAPYSP
101: AKSFDGMESA GMEMTVDGKQ GARPSILKDW GAAKSEV
101: AKSFDGMESA GMEMTVDGKQ GARPSILKDW GAAKSEV
001: MSKATIELDF LGLEKKQTNN APKPKFQKFL DRRRSFRDIQ GAISKIDPEI IKSLLASTGN NSDSSAKSRS VPSTPREDQP QIPISPVHAS LARSSTELVS
101: GTVPMTIFYN GSVSVFQVSR NKAGEIMKVA NEAASKKDES SMETDLSVIL PTTLRPKLFG QNLEGDLPIA RRKSLQRFLE KRKERLVSTS PYYPTSA
101: GTVPMTIFYN GSVSVFQVSR NKAGEIMKVA NEAASKKDES SMETDLSVIL PTTLRPKLFG QNLEGDLPIA RRKSLQRFLE KRKERLVSTS PYYPTSA
Arabidopsis Description
JAZ10jasmonate-zim-domain protein 10 [Source:TAIR;Acc:AT5G13220]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.