CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 5
mitochondrion 1
nucleus 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, nucleus, plastid
BaCelLo:	plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	plastid
PProwler:	plastid
TargetP:	plastid
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY21679	Canola	plastid	85.04	79.27
CDX96675	Canola	plastid	39.76	76.81
CDX83781	Canola	plastid	39.17	75.38
CDY26697	Canola	plastid	33.07	66.4
CDY41023	Canola	plastid	32.87	65.75
CDX73289	Canola	cytosol	20.08	54.26
CDY46022	Canola	nucleus	25.0	52.92
CDY37269	Canola	nucleus	24.61	52.08
CDY45408	Canola	cytosol	23.62	48.98
CDX73127	Canola	cytosol	23.03	47.76
CDX85865	Canola	cytosol	18.7	42.41
CDX68156	Canola	cytosol	14.76	41.44
VIT_11s0016g00710.t01	Wine grape	cytosol, plastid	21.46	40.67
Solyc07g042170.2.1	Tomato	cytosol	16.93	39.81
PGSC0003DMT400075155	Potato	nucleus	16.34	38.6
Solyc12g009220.1.1	Tomato	nucleus	18.11	36.51
PGSC0003DMT400007592	Potato	nucleus	17.32	34.65
GSMUA_Achr2P21770_001	Banana	mitochondrion	14.96	34.39
Zm00001d022139_P001	Maize	plastid	14.76	32.19
EER97533	Sorghum	plastid	14.76	31.91
HORVU2Hr1G031310.9	Barley	cytosol, mitochondrion, plastid	14.96	31.8
TraesCS2B01G195600.1	Wheat	plastid	14.37	31.6
EER92157	Sorghum	plastid	14.17	31.58
Os07t0615200-01	Rice	mitochondrion	15.16	31.56
GSMUA_Achr6P31050_001	Banana	cytosol	13.19	31.46
TraesCS2D01G176800.1	Wheat	plastid	14.17	31.17
Zm00001d029448_P001	Maize	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, plastid, vacuole	13.98	31.14
Os03t0402800-01	Rice	plastid	13.78	30.7
GSMUA_Achr3P02140_001	Banana	mitochondrion	12.2	29.67
TraesCS5D01G219300.2	Wheat	nucleus	13.39	29.57
GSMUA_Achr3P05920_001	Banana	nucleus	14.57	29.48
GSMUA_Achr9P14370_001	Banana	cytosol	15.35	29.43
GSMUA_Achr3P10270_001	Banana	cytosol	12.99	29.2
GSMUA_Achr5P22110_001	Banana	mitochondrion	14.17	29.15
TraesCS5B01G211000.1	Wheat	nucleus	12.99	28.7
Zm00001d006860_P001	Maize	plastid	14.76	28.2
TraesCS2A01G169300.1	Wheat	plastid	12.8	28.14
GSMUA_Achr11P...	Banana	cytosol	12.8	28.02
GSMUA_Achr5P05170_001	Banana	cytosol, mitochondrion, nucleus	13.19	27.8
Zm00001d005813_P002	Maize	cytosol, plastid	12.4	27.75
GSMUA_Achr7P19850_001	Banana	cytosol	12.99	27.27
EER98969	Sorghum	cytosol	11.81	27.15
GSMUA_AchrUn_...	Banana	nucleus	13.19	27.13
GSMUA_Achr8P16780_001	Banana	cytosol	13.39	26.88
Zm00001d020614_P001	Maize	cytosol, plastid	11.42	26.61
CDX96772	Canola	nucleus	13.98	26.59
GSMUA_Achr10P...	Banana	cytosol	8.46	26.54
Os09t0439200-01	Rice	plastid	12.01	26.29
CDY16574	Canola	cytoskeleton, cytosol, nucleus	9.25	23.62
CDY71875	Canola	cytosol	10.24	23.11
CDY48300	Canola	cytosol, mitochondrion, nucleus, vacuole	13.19	23.1
CDX92427	Canola	cytosol	9.06	22.89
TraesCS5A01G212800.1	Wheat	plastid	13.19	22.64
CDX96409	Canola	nucleus	12.01	22.26
CDY09086	Canola	cytosol	9.65	22.17
CDY71173	Canola	nucleus	11.81	22.06
GSMUA_Achr1P21870_001	Banana	mitochondrion	15.16	21.81
CDX72916	Canola	nucleus	11.61	21.77
CDY26248	Canola	mitochondrion, nucleus	11.02	21.13
HORVU5Hr1G062290.6	Barley	mitochondrion, plastid	12.2	21.02
CDY03638	Canola	nucleus	11.22	20.88
CDX81823	Canola	plastid	13.19	20.18

Protein Annotations

MapMan:15.5.45	Gene3D:3.40.50.1820	GO:A0A078CYK8	InterPro:AB_hydrolase	InterPro:AB_hydrolase_3	InterPro:CCT_CS
EnsemblPlants:CDX81917	ProteinID:CDX81917	ProteinID:CDX81917.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016787	EnsemblPlantsGene:GSBRNA2T00136878001	InterPro:IPR010399	InterPro:IPR029058	InterPro:Lipase_GDXG_put_SER_AS
PFAM:PF06200	PFAM:PF07859	PFAM:PF09425	ScanProsite:PS01174	PFscan:PS51320	PANTHER:PTHR23024
PANTHER:PTHR23024:SF251	SMART:SM00979	SUPFAM:SSF53474	InterPro:Tify_dom	UniParc:UPI0004EE97D8	SEG:seg

Description

BnaC08g36840D

Coordinates

chrLK031826:+:1462713..1466881

Molecular Weight (calculated)

56148.7 Da

IEP (calculated)

9.805

GRAVY (calculated)

-0.389

Length

508 amino acids

Sequence
(BLAST)

001: MSSPMESSDF AATRRFSRKP SFSQTCSRLS QYLKENGSFG DLSLGMSCKP EVNGIISRQP TTTMSLFPCE ASNMESIGQD VKPKNLFPRQ PSFSSSSSSL
101: PKEDILKMTQ ATTTSTRPVR PEPQTAPLTI FYGGQVIVFN DFSAEKAKEV MDLASKGTAN TFTGFTSNVN NNIQPGYATN LANNQTEMRS NIAPIPNQLP
201: RLMKITTQDP VQSSSTAMAC ELPIARRASL HRFLAKRKDR VTSKAPYQLN DPGKASSNPQ TGDNTTSWLG LAAEILRDRI RLLSKVSSLQ ERPNRTPRGR
301: NLHAVSSPEK NLSLRIYFPH TAVAGEENKK KLPLLVYFHG GGFIMGTAFF PIHHTFLTSV VSAADCIAVS VDYRRAPEHP IPIAYEDSWD AMEWIFRHIS
401: GTGPEDWLNE NADFGRVFIA GDSAGANIAH HMGIRAGKER REFKISGMTL FHPFFLSRVG AVGYFEGLWD IASPNSDKGV VDPWINVVGN PNSDRARVVV
501: QRFAEFLK

Best Arabidopsis Sequence Match ( AT1G19180.3 )
(BLAST)

001: MSSSMECSEF VGSRRFTGKK PSFSQTCSRL SQYLKENGSF GDLSLGMACK PDVNGTLGNS RQPTTTMSLF PCEASNMDSM VQDVKPTNLF PRQPSFSSSS
101: SSLPKEDVLK MTQTTRSVKP ESQTAPLTIF YAGQVIVFND FSAEKAKEVI NLASKGTANS LAKNQTDIRS NIATIANQVP HPRKTTTQEP IQSSPTPLTE
201: LPIARRASLH RFLEKRKDRV TSKAPYQLCD PAKASSNPQT TGNMSWLGLA AEI

Arabidopsis Description

TIFY10ATIFY10A [Source:UniProtKB/TrEMBL;Acc:A0A178W7G1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.