Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 3
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred distinct locusB in Crop
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| OQU75588 | Sorghum | nucleus | 62.22 | 63.88 |
| OQU80776 | Sorghum | nucleus | 62.22 | 63.88 |
| OQU80777 | Sorghum | nucleus | 60.0 | 57.86 |
| KXG25462 | Sorghum | nucleus | 53.33 | 51.8 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 53.33 | 51.61 |
| OQU86344 | Sorghum | nucleus | 45.56 | 48.05 |
| Os08t0543700-00 | Rice | nucleus, peroxisome, plastid | 46.3 | 47.53 |
| EER99201 | Sorghum | nucleus | 48.15 | 43.92 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 43.7 | 42.75 |
| Bra017527.1-P | Field mustard | nucleus | 26.3 | 31.42 |
| Bra013263.1-P | Field mustard | nucleus | 25.93 | 25.83 |
| VIT_02s0025g02610.t01 | Wine grape | nucleus | 28.52 | 21.33 |
| Bra024992.1-P | Field mustard | nucleus | 21.11 | 21.03 |
| CDY70013 | Canola | nucleus | 19.26 | 20.63 |
| AT4G00870.1 | Thale cress | nucleus, plastid | 31.11 | 19.86 |
| Solyc10g009290.1.1 | Tomato | nucleus | 32.22 | 19.29 |
| PGSC0003DMT400014089 | Potato | nucleus | 27.41 | 19.27 |
| PGSC0003DMT400047220 | Potato | nucleus | 31.85 | 19.03 |
| PGSC0003DMT400028057 | Potato | nucleus | 27.41 | 19.02 |
| Solyc01g096370.2.1 | Tomato | nucleus | 31.48 | 18.89 |
| PGSC0003DMT400014097 | Potato | nucleus | 31.48 | 18.6 |
| Solyc10g009270.2.1 | Tomato | nucleus | 27.04 | 18.58 |
| Solyc08g083170.1.1 | Tomato | extracellular | 26.3 | 18.35 |
| KRH47834 | Soybean | nucleus | 31.48 | 18.32 |
| KRH06400 | Soybean | nucleus | 31.11 | 18.03 |
| PGSC0003DMT400031899 | Potato | plastid | 28.15 | 17.63 |
| VIT_15s0048g02820.t01 | Wine grape | nucleus | 32.22 | 17.5 |
| Bra017520.1-P | Field mustard | nucleus | 28.52 | 15.46 |
| Bra024998.1-P | Field mustard | nucleus | 32.96 | 15.34 |
| EES01345 | Sorghum | nucleus | 27.41 | 15.29 |
| AT5G46830.1 | Thale cress | nucleus | 28.52 | 15.07 |
| Bra017523.1-P | Field mustard | nucleus | 28.15 | 14.99 |
| AT5G46760.1 | Thale cress | nucleus | 32.59 | 14.86 |
| EER93685 | Sorghum | mitochondrion | 20.0 | 14.52 |
| AT4G17880.1 | Thale cress | nucleus | 31.48 | 14.43 |
| Bra010178.1-P | Field mustard | nucleus | 31.85 | 14.33 |
| Solyc08g005050.2.1 | Tomato | nucleus | 24.44 | 14.22 |
| PGSC0003DMT400002963 | Potato | nucleus | 31.48 | 14.21 |
| KRH74418 | Soybean | nucleus | 33.7 | 14.17 |
| KRH75613 | Soybean | nucleus | 33.33 | 14.13 |
| PGSC0003DMT400015017 | Potato | nucleus | 23.7 | 14.04 |
| AT1G32640.1 | Thale cress | nucleus | 32.22 | 13.96 |
| Solyc08g008600.2.1 | Tomato | nucleus | 23.33 | 13.94 |
| EES10849 | Sorghum | nucleus | 17.78 | 13.91 |
| KRH45440 | Soybean | nucleus | 32.96 | 13.61 |
| VIT_02s0012g01320.t01 | Wine grape | nucleus | 32.96 | 13.42 |
| KXG39824 | Sorghum | nucleus | 15.93 | 13.19 |
| KXG37671 | Sorghum | nucleus | 17.04 | 12.92 |
| EER93684 | Sorghum | nucleus | 18.15 | 12.73 |
| Solyc08g076930.1.1 | Tomato | nucleus | 32.22 | 12.63 |
| PGSC0003DMT400045204 | Potato | nucleus | 32.22 | 12.54 |
| KXG39194 | Sorghum | nucleus | 32.59 | 12.45 |
| KXG37866 | Sorghum | nucleus | 17.04 | 12.4 |
| OQU92032 | Sorghum | nucleus | 15.56 | 12.35 |
| OQU92034 | Sorghum | nucleus | 14.44 | 12.3 |
| KRH39540 | Soybean | nucleus | 32.59 | 12.04 |
| Bra024993.1-P | Field mustard | nucleus | 16.3 | 11.67 |
| KXG24110 | Sorghum | nucleus | 17.04 | 11.56 |
| OQU77369 | Sorghum | nucleus | 17.41 | 11.19 |
| OQU75589 | Sorghum | nucleus | 15.56 | 10.91 |
| EES19274 | Sorghum | nucleus | 22.96 | 10.56 |
| EER99993 | Sorghum | nucleus | 23.7 | 10.29 |
| OQU82119 | Sorghum | nucleus | 18.15 | 8.97 |
| OQU82120 | Sorghum | nucleus | 19.26 | 8.84 |
| OQU82117 | Sorghum | nucleus | 19.26 | 8.81 |
| OQU81560 | Sorghum | nucleus | 17.78 | 8.15 |
| OQU88697 | Sorghum | nucleus | 19.26 | 7.68 |
| Bra013264.1-P | Field mustard | nucleus | 5.93 | 5.39 |
| CDY70012 | Canola | nucleus | 3.33 | 3.37 |
Protein Annotations
| MapMan:15.5.32 | Gene3D:4.10.280.10 | UniProt:A0A1Z5RAJ4 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:OQU80778 |
| ProteinID:OQU80778 | ProteinID:OQU80778.1 | ProteinID:OQU80779.1 | ProteinID:OQU80780.1 | PFAM:PF00010 | PFscan:PS50888 |
| PANTHER:PTHR11514 | PANTHER:PTHR11514:SF68 | SMART:SM00353 | EnsemblPlantsGene:SORBI_3007G183200 | SUPFAM:SSF47459 | UniParc:UPI000B8BAF68 |
| InterPro:bHLH_dom | SEG:seg | : | : | : | : |
Description
hypothetical protein
Coordinates
chr7:+:61641934..61646818
Molecular Weight (calculated)
28989.5 Da
IEP (calculated)
7.592
GRAVY (calculated)
-0.227
Length
270 amino acids
Sequence
(BLAST)
(BLAST)
001: MDELVFPASS SSCPSPASFS TAGHHQEHEF VPCDFLEGWL GGDDDWPDLD EPPSGVTWGG EGSRSLRNDH HLSGEPPATA LKRRGRKPAS RNNTNSPALC
101: HVEAERQRRD KLNRLFCELR AAVPTVSRMD KASVLADATS YIAQLRQRVQ QLEAEAKKKA AAAAAALTTV VAPFSHSFII SGSGQQLGEK LEVRMVGTEA
201: AALRLTTATA AVRHAPARLM LALQSLDLPH ACVCLVGGVT VQDAVVEVPA ALRDDRALRA ALLHRLLRTG
101: HVEAERQRRD KLNRLFCELR AAVPTVSRMD KASVLADATS YIAQLRQRVQ QLEAEAKKKA AAAAAALTTV VAPFSHSFII SGSGQQLGEK LEVRMVGTEA
201: AALRLTTATA AVRHAPARLM LALQSLDLPH ACVCLVGGVT VQDAVVEVPA ALRDDRALRA ALLHRLLRTG
001: MTDYRLQPTM NLWTTDDNAS MMEAFMSSSD ISTLWPPAST TTTTATTETT PTPAMEIPAQ AGFNQETLQQ RLQALIEGTH EGWTYAIFWQ PSYDFSGASV
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
101: LGWGDGYYKG EEDKANPRRR SSSPPFSTPA DQEYRKKVLR ELNSLISGGV APSDDAVDEE VTDTEWFFLV SMTQSFACGA GLAGKAFATG NAVWVSGSDQ
201: LSGSGCERAK QGGVFGMHTI ACIPSANGVV EVGSTEPIRQ SSDLINKVRI LFNFDGGAGD LSGLNWNLDP DQGENDPSMW INDPIGTPGS NEPGNGAPSS
301: SSQLFSKSIQ FENGSSSTIT ENPNLDPTPS PVHSQTQNPK FNNTFSRELN FSTSSSTLVK PRSGEILNFG DEGKRSSGNP DPSSYSGQTQ FENKRKRSMV
401: LNEDKVLSFG DKTAGESDHS DLEASVVKEV AVEKRPKKRG RKPANGREEP LNHVEAERQR REKLNQRFYA LRAVVPNVSK MDKASLLGDA IAYINELKSK
501: VVKTESEKLQ IKNQLEEVKL ELAGRKASAS GGDMSSSCSS IKPVGMEIEV KIIGWDAMIR VESSKRNHPA ARLMSALMDL ELEVNHASMS VVNDLMIQQA
601: TVKMGFRIYT QEQLRASLIS KIG
Arabidopsis Description
MYC2ZBF1 [Source:UniProtKB/TrEMBL;Acc:A0A178W7C3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.