Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d033412_P001 | Maize | nucleus | 80.05 | 80.49 |
| EES10849 | Sorghum | nucleus | 53.64 | 57.68 |
| EER93685 | Sorghum | mitochondrion | 57.68 | 57.53 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 54.18 | 56.3 |
| TraesCS4D01G018700.1 | Wheat | nucleus | 53.91 | 55.4 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 54.45 | 55.34 |
| TraesCS4D01G306400.1 | Wheat | nucleus | 24.26 | 54.55 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 53.91 | 54.05 |
| TraesCS4D01G019200.1 | Wheat | nucleus | 52.29 | 53.89 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 52.29 | 53.44 |
| HORVU3Hr1G002620.1 | Barley | plastid | 32.88 | 53.04 |
| TraesCS4A01G292800.1 | Wheat | nucleus | 52.56 | 52.99 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 50.67 | 50.95 |
| TraesCS4D01G306300.1 | Wheat | nucleus | 45.55 | 49.56 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 47.98 | 49.44 |
| TraesCS3A01G019000.1 | Wheat | nucleus | 41.78 | 48.59 |
| TraesCS3D01G014900.1 | Wheat | nucleus | 43.94 | 48.51 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 42.86 | 48.48 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 47.44 | 48.35 |
| TraesCS4A01G408700.1 | Wheat | nucleus | 35.04 | 48.15 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 44.47 | 47.55 |
| TraesCS4A01G408800.1 | Wheat | nucleus | 47.71 | 46.09 |
| TraesCS3A01G019100.1 | Wheat | nucleus | 38.81 | 45.28 |
| HORVU4Hr1G078880.2 | Barley | nucleus | 44.2 | 44.93 |
| HORVU4Hr1G078910.2 | Barley | nucleus | 43.4 | 43.4 |
| EER93684 | Sorghum | nucleus | 44.47 | 42.86 |
| OQU75589 | Sorghum | nucleus | 43.13 | 41.56 |
| OQU77369 | Sorghum | nucleus | 46.9 | 41.43 |
| KXG24110 | Sorghum | nucleus | 43.4 | 40.45 |
| KXG37671 | Sorghum | nucleus | 31.81 | 33.15 |
| KXG39824 | Sorghum | nucleus | 22.64 | 25.77 |
| OQU92034 | Sorghum | nucleus | 19.41 | 22.71 |
| OQU92032 | Sorghum | nucleus | 20.22 | 22.06 |
| KXG25462 | Sorghum | nucleus | 13.75 | 18.35 |
| OQU80778 | Sorghum | nucleus | 12.4 | 17.04 |
| OQU80776 | Sorghum | nucleus | 11.86 | 16.73 |
| OQU75588 | Sorghum | nucleus | 11.86 | 16.73 |
| EER99201 | Sorghum | nucleus | 13.21 | 16.55 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 12.13 | 16.3 |
| OQU86344 | Sorghum | nucleus | 11.05 | 16.02 |
| OQU80777 | Sorghum | nucleus | 11.86 | 15.71 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 11.32 | 15.05 |
| EES01345 | Sorghum | nucleus | 15.09 | 11.57 |
| EER99993 | Sorghum | nucleus | 16.44 | 9.81 |
| EES19274 | Sorghum | nucleus | 15.36 | 9.71 |
| OQU82120 | Sorghum | nucleus | 15.36 | 9.69 |
| OQU82117 | Sorghum | nucleus | 15.36 | 9.66 |
| OQU82119 | Sorghum | nucleus | 13.75 | 9.34 |
| OQU81560 | Sorghum | nucleus | 14.82 | 9.34 |
| KXG39194 | Sorghum | nucleus | 16.44 | 8.63 |
| OQU88697 | Sorghum | nucleus | 14.82 | 8.12 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | UniProt:A0A1B6QIX2 | InterPro:ACT_dom | ncoils:Coil |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR002912 |
| InterPro:IPR011598 | InterPro:IPR036638 | ProteinID:KXG37865.1 | EnsemblPlants:KXG37866 | ProteinID:KXG37866 | ProteinID:KXG37866.1 |
| PFAM:PF00010 | PFscan:PS50888 | PFscan:PS51671 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | SMART:SM00353 |
| EnsemblPlantsGene:SORBI_3001G140900 | SUPFAM:SSF47459 | UniParc:UPI0003C6FB0F | InterPro:bHLH_dom | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr1:-:11261789..11268117
Molecular Weight (calculated)
39387.2 Da
IEP (calculated)
5.446
GRAVY (calculated)
-0.298
Length
371 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSSIFLQW AMNTLRHEQP AAAAVNDDCS SEATFPSLQA LREASHAAEM VQELIEEAPA NSWSSGDTTD GSSGGGNNNN NSAPAAAAAA AAMDHDVVWP
101: ASKTTSPVSR PTLSRSSSVT NPPLSWNFSA AASAQLGSDG GMLPEFAHKR ALPLDQVYGS PPARRAGLRS PAGSMSAPYA QDHIIAERKR REKINQRFIE
201: LSTVIPGLKK MDKATILSDA TKYVKELQEK LKDLEAGGSN GRSRSIETVV LVKRPCLHAA AAAPDDDGSP LSASSGTSPA ERKTQLPEIE ARFSEKSVMV
301: RIHCEDGKGV AVKVLAEVEE LHLSIIHANV LPFAEGTLII TITAKVEEGF TVTAEEIVGR LNSIWTSAQP A
101: ASKTTSPVSR PTLSRSSSVT NPPLSWNFSA AASAQLGSDG GMLPEFAHKR ALPLDQVYGS PPARRAGLRS PAGSMSAPYA QDHIIAERKR REKINQRFIE
201: LSTVIPGLKK MDKATILSDA TKYVKELQEK LKDLEAGGSN GRSRSIETVV LVKRPCLHAA AAAPDDDGSP LSASSGTSPA ERKTQLPEIE ARFSEKSVMV
301: RIHCEDGKGV AVKVLAEVEE LHLSIIHANV LPFAEGTLII TITAKVEEGF TVTAEEIVGR LNSIWTSAQP A
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.