Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d038966_P001 | Maize | plastid | 47.54 | 80.39 |
| Zm00001d026009_P001 | Maize | plastid | 46.96 | 79.41 |
| Zm00001d003604_P001 | Maize | nucleus | 75.94 | 77.98 |
| Zm00001d025462_P001 | Maize | nucleus | 71.01 | 74.24 |
| KXG37866 | Sorghum | nucleus | 57.68 | 53.64 |
| TraesCS4D01G306400.1 | Wheat | nucleus | 25.22 | 52.73 |
| HORVU3Hr1G002620.1 | Barley | plastid | 33.62 | 50.43 |
| TraesCS4B01G021500.1 | Wheat | nucleus | 52.17 | 50.42 |
| TraesCS4D01G019200.1 | Wheat | nucleus | 52.17 | 50.0 |
| TraesCS4B01G020900.1 | Wheat | nucleus | 53.62 | 50.0 |
| TraesCS4A01G292800.1 | Wheat | nucleus | 53.33 | 50.0 |
| TraesCS4D01G018700.1 | Wheat | nucleus | 52.17 | 49.86 |
| EER93685 | Sorghum | mitochondrion | 53.62 | 49.73 |
| HORVU4Hr1G003210.1 | Barley | nucleus | 52.17 | 49.32 |
| TraesCS4B01G021100.1 | Wheat | nucleus | 51.59 | 49.04 |
| TraesCS3D01G014900.1 | Wheat | nucleus | 47.54 | 48.81 |
| TraesCS4B01G021200.1 | Wheat | nucleus | 52.17 | 48.78 |
| TraesCS3A01G019000.1 | Wheat | nucleus | 44.93 | 48.59 |
| TraesCS3B01G029800.1 | Wheat | nucleus | 45.8 | 48.17 |
| TraesCS4D01G306300.1 | Wheat | nucleus | 47.54 | 48.09 |
| TraesCS4B01G308100.1 | Wheat | nucleus | 47.83 | 47.55 |
| TraesCS4A01G408700.1 | Wheat | nucleus | 37.1 | 47.41 |
| TraesCS4B01G308200.1 | Wheat | nucleus | 48.99 | 46.94 |
| TraesCS4B01G308300.1 | Wheat | nucleus | 48.7 | 46.15 |
| HORVU4Hr1G078880.2 | Barley | nucleus | 48.7 | 46.03 |
| TraesCS3A01G019100.1 | Wheat | nucleus | 42.32 | 45.91 |
| TraesCS4A01G408800.1 | Wheat | nucleus | 49.86 | 44.79 |
| EER93684 | Sorghum | nucleus | 48.99 | 43.9 |
| HORVU4Hr1G078910.2 | Barley | nucleus | 44.64 | 41.51 |
| OQU77369 | Sorghum | nucleus | 47.83 | 39.29 |
| OQU75589 | Sorghum | nucleus | 42.9 | 38.44 |
| KXG24110 | Sorghum | nucleus | 42.61 | 36.93 |
| KXG37671 | Sorghum | nucleus | 31.01 | 30.06 |
| KXG39824 | Sorghum | nucleus | 24.06 | 25.46 |
| OQU92034 | Sorghum | nucleus | 18.26 | 19.87 |
| OQU92032 | Sorghum | nucleus | 19.42 | 19.71 |
| KXG25462 | Sorghum | nucleus | 14.78 | 18.35 |
| OQU80778 | Sorghum | nucleus | 13.91 | 17.78 |
| EER97058 | Sorghum | cytosol, nucleus, plastid | 13.91 | 17.39 |
| EER99201 | Sorghum | nucleus | 14.49 | 16.89 |
| OQU86344 | Sorghum | nucleus | 12.46 | 16.8 |
| OQU80777 | Sorghum | nucleus | 13.62 | 16.79 |
| OQU80776 | Sorghum | nucleus | 12.75 | 16.73 |
| OQU75588 | Sorghum | nucleus | 12.75 | 16.73 |
| OQU80775 | Sorghum | cytosol, nucleus, peroxisome, plastid | 13.33 | 16.49 |
| EES01345 | Sorghum | nucleus | 16.81 | 11.98 |
| OQU82120 | Sorghum | nucleus | 17.68 | 10.37 |
| OQU82117 | Sorghum | nucleus | 17.39 | 10.17 |
| OQU81560 | Sorghum | nucleus | 16.81 | 9.85 |
| EER99993 | Sorghum | nucleus | 17.39 | 9.65 |
| OQU82119 | Sorghum | nucleus | 15.07 | 9.52 |
| EES19274 | Sorghum | nucleus | 15.94 | 9.37 |
| KXG39194 | Sorghum | nucleus | 17.68 | 8.63 |
| OQU88697 | Sorghum | nucleus | 15.36 | 7.83 |
Protein Annotations
| MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EntrezGene:8075841 | InterPro:ACT_dom | UniProt:C5Y8U6 |
| ncoils:Coil | EnsemblPlants:EES10849 | ProteinID:EES10849 | ProteinID:EES10849.1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf | InterPro:IPR002912 | InterPro:IPR011598 | InterPro:IPR036638 |
| PFAM:PF00010 | PFscan:PS50888 | PFscan:PS51671 | PANTHER:PTHR23042 | PANTHER:PTHR23042:SF74 | SMART:SM00353 |
| EnsemblPlantsGene:SORBI_3006G089000 | SUPFAM:SSF47459 | UniParc:UPI0001A86D33 | RefSeq:XP_002446521.1 | InterPro:bHLH_dom | SEG:seg |
Description
hypothetical protein
Coordinates
chr6:+:45810164..45814268
Molecular Weight (calculated)
36922.8 Da
IEP (calculated)
5.117
GRAVY (calculated)
-0.242
Length
345 amino acids
Sequence
(BLAST)
(BLAST)
001: MEDSGLFMQW AMTTLQHDED LTVAVGVAPI DDGRGGATFP SLQALREASQ AAEMIQELIG EPQPHAANDC CSGDDGGTAG NTSSGTAPRR SSSSSSATTQ
101: PVSWNFGAAP VPPDQAAATV SLLPDMVCRS PPTRRAVLKT VGSIYAQDHI IAERKRREKI NQRFIELSTV IPGLKKMDKA TILSDATRYV KELQEKLKTL
201: EDDGGSGSND RGVMESWVLV KKPCIAAVPE DAAGSSPSWD SSGTSPARNP LPEIEARFLN KNVMVRIHCV DGKGVAVRVL AELEELHLSI VHANVMPFQA
301: CTLIITITAK VDEGFTVTAE EIVGRLKSAA IMHQQSRCNS TEETA
101: PVSWNFGAAP VPPDQAAATV SLLPDMVCRS PPTRRAVLKT VGSIYAQDHI IAERKRREKI NQRFIELSTV IPGLKKMDKA TILSDATRYV KELQEKLKTL
201: EDDGGSGSND RGVMESWVLV KKPCIAAVPE DAAGSSPSWD SSGTSPARNP LPEIEARFLN KNVMVRIHCV DGKGVAVRVL AELEELHLSI VHANVMPFQA
301: CTLIITITAK VDEGFTVTAE EIVGRLKSAA IMHQQSRCNS TEETA
001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI
Arabidopsis Description
BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.