Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH58187 | Soybean | endoplasmic reticulum | 88.56 | 89.88 |
| KRH77193 | Soybean | nucleus | 51.91 | 53.96 |
| KRH40248 | Soybean | cytosol | 18.48 | 43.75 |
| KRH09683 | Soybean | nucleus | 30.79 | 40.08 |
| KRH23624 | Soybean | nucleus | 32.55 | 39.08 |
| KRH28295 | Soybean | nucleus | 35.19 | 38.34 |
| KRH49880 | Soybean | nucleus | 36.95 | 38.3 |
| KRH77195 | Soybean | nucleus | 40.18 | 37.23 |
| KRH23623 | Soybean | nucleus | 23.17 | 36.24 |
| KRH04346 | Soybean | nucleus | 39.3 | 36.12 |
| KRH58189 | Soybean | nucleus | 40.18 | 35.86 |
| KRH44511 | Soybean | nucleus | 34.02 | 35.37 |
| KRH44509 | Soybean | nucleus | 21.99 | 35.21 |
| KRH47401 | Soybean | nucleus | 20.82 | 34.98 |
| KRH10664 | Soybean | nucleus | 37.83 | 34.96 |
| KRH09685 | Soybean | cytosol | 30.21 | 34.8 |
| KRH47399 | Soybean | nucleus | 34.6 | 34.6 |
| KRH21680 | Soybean | nucleus, vacuole | 38.12 | 34.57 |
| KRH23621 | Soybean | nucleus | 29.33 | 34.36 |
| KRH58186 | Soybean | nucleus | 34.9 | 32.96 |
| KRH04348 | Soybean | nucleus | 35.78 | 32.71 |
| KRH28296 | Soybean | nucleus | 33.14 | 32.38 |
| KRH42021 | Soybean | nucleus | 18.48 | 32.31 |
| KRH77192 | Soybean | nucleus | 32.26 | 32.26 |
| KRH44510 | Soybean | nucleus | 25.81 | 32.0 |
| KRH47400 | Soybean | nucleus | 24.63 | 31.23 |
| KRH00980 | Soybean | nucleus | 18.48 | 31.03 |
| KRH00979 | Soybean | nucleus | 27.57 | 30.92 |
| KRH66425 | Soybean | nucleus | 28.15 | 30.77 |
| Solyc02g091800.2.1 | Tomato | nucleus | 31.09 | 30.55 |
| KRH48860 | Soybean | nucleus | 27.86 | 30.06 |
| PGSC0003DMT400078696 | Potato | nucleus | 30.21 | 29.68 |
| KRH00981 | Soybean | nucleus | 27.57 | 28.92 |
| KRH47398 | Soybean | nucleus | 31.38 | 28.92 |
| KRH44512 | Soybean | nucleus | 31.38 | 28.53 |
| KRH40246 | Soybean | nucleus, vacuole | 22.29 | 28.15 |
| KRH48858 | Soybean | nucleus | 26.1 | 27.64 |
| KRH66407 | Soybean | nucleus | 31.38 | 27.44 |
| KRH48847 | Soybean | nucleus | 30.5 | 27.3 |
| KRH47834 | Soybean | nucleus | 15.54 | 11.42 |
| KRH06400 | Soybean | nucleus | 15.25 | 11.16 |
| KRH75613 | Soybean | nucleus | 19.94 | 10.68 |
| KRH45440 | Soybean | nucleus | 19.94 | 10.4 |
| KRH74418 | Soybean | nucleus | 18.77 | 9.97 |
| KRH32144 | Soybean | nucleus | 14.66 | 9.92 |
| KRH19522 | Soybean | nucleus | 14.66 | 9.88 |
| KRH68922 | Soybean | nucleus | 14.37 | 8.91 |
| KRH39540 | Soybean | nucleus | 18.48 | 8.62 |
| KRH67189 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.37 | 8.57 |
| KRG95511 | Soybean | cytosol, mitochondrion, nucleus, plastid | 14.66 | 8.5 |
| KRH32008 | Soybean | extracellular, plastid | 16.42 | 8.43 |
| KRH71432 | Soybean | nucleus | 16.13 | 8.42 |
| KRH06456 | Soybean | nucleus | 15.25 | 8.41 |
| KRH41187 | Soybean | nucleus | 15.54 | 8.41 |
| KRG97199 | Soybean | nucleus | 14.96 | 8.24 |
| KRH05127 | Soybean | nucleus, plastid | 7.04 | 8.19 |
| KRH59908 | Soybean | nucleus | 14.96 | 8.08 |
| KRH47899 | Soybean | nucleus | 14.37 | 7.83 |
| KRH65046 | Soybean | nucleus | 14.08 | 7.42 |
| KRH48144 | Soybean | nucleus | 13.78 | 7.23 |
Protein Annotations
| EntrezGene:100803386 | MapMan:15.5.32 | MapMan:25.4.1.7 | Gene3D:4.10.280.10 | EMBL:ACUP02010404 | ncoils:Coil |
| EnsemblPlantsGene:GLYMA_17G156000 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 | GO:GO:0046983 | InterPro:HLH_DNA-bd_sf |
| UniProt:I1MVF9 | InterPro:IPR011598 | InterPro:IPR036638 | EnsemblPlants:KRH04347 | ProteinID:KRH04347 | ProteinID:KRH04347.1 |
| PFAM:PF00010 | PFscan:PS50888 | PANTHER:PTHR11514 | PANTHER:PTHR11514:SF48 | SMART:SM00353 | SUPFAM:SSF47459 |
| UniParc:UPI000233EDAB | InterPro:bHLH_dom | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr17:+:13251019..13253638
Molecular Weight (calculated)
37827.0 Da
IEP (calculated)
5.540
GRAVY (calculated)
-0.392
Length
341 amino acids
Sequence
(BLAST)
(BLAST)
001: MTSMEESWTS WLCDMEPDDY SFMGQSDIKV DDVNGTLASP HDVATALLEK NQQSSFSTVE SLSSAAESGL ERPFKLPKIE QLSQKTASSS TPSSYILSFD
101: NTNPPPVTVE SASKPGTKVL NLEKVLPSKN EPRRVVTQQN KKMGSFAGSS HHTQDHIIAE RMRREKISQK LIALSALIPD LKKMDKVSVL GEAIRYVKQL
201: KEQVKVLEEQ SKRKNEESVV FAKKSQVFPA DEDVSDTSSN SCEFGNSDDI STKATLSLPE VEARVSKKSV LIRILCEKEK AVLVNIFREI EKLHLSVVNS
301: SALSFGSSVL DTTIVAEMED EFNMGVKELA RNLRVGLMQF M
101: NTNPPPVTVE SASKPGTKVL NLEKVLPSKN EPRRVVTQQN KKMGSFAGSS HHTQDHIIAE RMRREKISQK LIALSALIPD LKKMDKVSVL GEAIRYVKQL
201: KEQVKVLEEQ SKRKNEESVV FAKKSQVFPA DEDVSDTSSN SCEFGNSDDI STKATLSLPE VEARVSKKSV LIRILCEKEK AVLVNIFREI EKLHLSVVNS
301: SALSFGSSVL DTTIVAEMED EFNMGVKELA RNLRVGLMQF M
001: MATAMNVFST KWSSELDIEE YSIIHQFHMN SLVGDVPQSL SSLDDTTTCY NLDASCNKSL VEERPSKILK TTHISPNLHP FSSSNPPPPK HQPSSRILSF
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
101: EKTGLHVMNH NSPNLIFSPK DEEIGLPEHK KAELIIRGTK RAQSLTRSQS NAQDHILAER KRREKLTQRF VALSALIPGL KKMDKASVLG DAIKHIKYLQ
201: ESVKEYEEQK KEKTMESVVL VKKSSLVLDE NHQPSSSSSS DGNRNSSSSN LPEIEVRVSG KDVLIKILCE KQKGNVIKIM GEIEKLGLSI TNSNVLPFGP
301: TFDISIIAQK NNNFDMKIED VVKNLSFGLS KLT
Arabidopsis Description
basic helix-loop-helix (bHLH) DNA-binding superfamily protein [Source:TAIR;Acc:AT2G22750]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.