Factsheet for Solyc02g091800.2.1

Subcellular Localization

min:

: max

Winner_takes_all: nucleus

Predictor Summary:

nucleus 6
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus
Any Predictor:	mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	nucleus
MultiLoc:	nucleus
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	nucleus

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400078696	Potato	nucleus	87.03	87.03
Solyc01g106460.2.1	Tomato	nucleus	27.67	39.51
KRH58187	Soybean	endoplasmic reticulum	31.41	32.44
KRH04347	Soybean	nucleus	30.55	31.09
KRH77193	Soybean	nucleus	27.95	29.57
Solyc02g091810.1.1	Tomato	nucleus	26.51	28.93
Solyc06g064590.1.1	Tomato	nucleus	23.34	28.83
Solyc02g091820.1.1	Tomato	nucleus	26.51	28.22
Solyc05g009640.2.1	Tomato	cytosol, nucleus, peroxisome	19.02	28.21
Solyc06g064580.1.1	Tomato	nucleus	23.05	26.32
Solyc10g009270.2.1	Tomato	nucleus	16.14	14.25
Solyc08g083170.1.1	Tomato	extracellular	15.56	13.95
Solyc08g008600.2.1	Tomato	nucleus	17.58	13.5
Solyc10g009290.1.1	Tomato	nucleus	16.71	12.86
Solyc01g096370.2.1	Tomato	nucleus	14.7	11.33
Solyc06g083980.1.1	Tomato	nucleus	12.39	9.01
Solyc08g076930.1.1	Tomato	nucleus	17.29	8.71
Solyc08g005050.2.1	Tomato	nucleus	10.95	8.19
Solyc05g050560.1.1	Tomato	nucleus	13.26	7.94
Solyc09g065100.1.1	Tomato	nucleus	15.56	7.94
Solyc01g096050.2.1	Tomato	nucleus	13.54	7.77
Solyc08g081140.2.1	Tomato	nucleus	13.54	7.51

Protein Annotations

EnsemblPlants:Solyc02g091800.2.1	EnsemblPlantsGene:Solyc02g091800.2	Gene3D:4.10.280.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0046983	InterPro:HLH_DNA-bd_sf	InterPro:IPR011598	InterPro:IPR036638	InterPro:bHLH_dom	ncoils:Coil
PANTHER:PTHR23042	PANTHER:PTHR23042:SF75	PFAM:PF00010	PFscan:PS50888	SEG:seg	SMART:SM00353
SUPFAM:SSF47459	UniParc:UPI0002767B70	UniProt:K4BCX8	MapMan:15.5.32	MapMan:25.4.1.7	:

Description

No Description!

Coordinates

chr2:+:53012555..53014066

Molecular Weight (calculated)

39539.9 Da

IEP (calculated)

7.868

GRAVY (calculated)

-0.629

Length

347 amino acids

Sequence
(BLAST)

001: MDNSSLSQWF SRTEEGVFYS NRNNSIDDFT TQKSTISEDQ ETSELSITPD SARSNSRSYF HKEISKCKAS KINFSLITPM ENFPIGSKRP ATDHPQQPKL
101: NKISSSSHRF LSFNNNNNNT DSVFPSHQGC KIEAMDDMYL CDSSDQMFYP YVKSNGCYDA KDKKGGKKIP SVELQDHIIA ERKRREKLSQ RFVALSTILP
201: GLKKVDKASI LEQAIKHVKD LKEKVQLLEE EKKSVMFVNK YKVETEEYTS SEENNSGSDL PADIEVRFSD NNVLIRITCA RRNAFVLNIH SEIEKLHLTI
301: VQSSMMPFGK QAIDITLVAQ MEESFCMTLK DVAKHVRMVT GRLMTQA

Best Arabidopsis Sequence Match ( AT4G37850.2 )
(BLAST)

001: MSILSTRWFS EQEIEENSII QQFHMNSIVG EVQEAQYIFP HSFTTNNDPS YDDLIEMKPP KILETTYISP SSHLPPNSKP HHIHRHSSSR ILSFEDYGSN
101: DMEHEYSPTY LNSIFSPKLE AQVQPHQKSD EFNRKGTKRA QPFSRNQSNA QDHIIAERKR REKLTQRFVA LSALVPGLKK MDKASVLGDA LKHIKYLQER
201: VGELEEQKKE RRLESMVLVK KSKLILDDNN QSFSSSCEDG FSDLDLPEIE VRFSDEDVLI KILCEKQKGH LAKIMAEIEK LHILITNSSV LNFGPTLDIT
301: IIAKKESDFD MTLMDVVKSL RSALSNFI

Arabidopsis Description

BHLH25Transcription factor bHLH25 [Source:UniProtKB/Swiss-Prot;Acc:Q9T072]
SUBAcon: [nucleus]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.