Factsheet for TraesCS4D01G339200.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G512800.2	Wheat	mitochondrion	97.17	97.17
TraesCS4B01G344100.1	Wheat	mitochondrion	96.89	96.89
HORVU4Hr1G084340.1	Barley	mitochondrion	93.07	93.07
OQU93256	Sorghum	mitochondrion	75.53	76.5
Os03t0142500-01	Rice	plasma membrane	73.83	75.22
Zm00001d027622_P001	Maize	mitochondrion	73.55	75.14
GSMUA_Achr5P20480_001	Banana	mitochondrion	47.95	53.47
GSMUA_Achr11P...	Banana	mitochondrion	46.96	53.12
GSMUA_Achr1P03470_001	Banana	mitochondrion, plastid	46.68	51.56
VIT_13s0019g04440.t01	Wine grape	endoplasmic reticulum	50.78	50.56
TraesCS2D01G361900.1	Wheat	mitochondrion	49.08	50.14
VIT_06s0004g02630.t01	Wine grape	mitochondrion, nucleus	51.34	49.79
GSMUA_Achr11P...	Banana	mitochondrion	37.34	49.07
TraesCS6D01G207700.2	Wheat	mitochondrion	49.22	49.01
CDY31517	Canola	extracellular, mitochondrion, plastid	41.3	48.83
CDY52708	Canola	extracellular, mitochondrion, plastid	41.3	48.51
CDY72156	Canola	cytosol, endoplasmic reticulum, nucleus, plastid	36.63	48.05
Bra020234.1-P	Field mustard	mitochondrion	46.96	47.77
CDY67781	Canola	cytosol	35.36	47.26
AT5G60710.1	Thale cress	extracellular, mitochondrion, plastid	46.96	47.16
Solyc05g056140.2.1	Tomato	nucleus	48.51	47.12
PGSC0003DMT400059986	Potato	nucleus	48.37	47.04
Bra005066.1-P	Field mustard	mitochondrion	43.42	46.8
CDY32819	Canola	cytosol	39.89	46.69
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	48.51	46.48
PGSC0003DMT400020896	Potato	mitochondrion, plastid	48.09	46.38
Bra002456.1-P	Field mustard	mitochondrion, plastid	45.83	46.29
Solyc11g069600.1.1	Tomato	plastid	47.95	46.25
Bra030712.1-P	Field mustard	cytosol, endoplasmic reticulum, nucleus, plastid	39.75	45.99
CDX74871	Canola	mitochondrion	39.6	45.9
AT2G38970.1	Thale cress	mitochondrion	44.7	45.66
AT1G08050.1	Thale cress	plastid	41.3	45.55
CDX91506	Canola	mitochondrion	38.9	45.23
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	36.07	44.89
AT3G54780.4	Thale cress	endoplasmic reticulum, extracellular, plastid	41.44	42.96
TraesCS5D01G472700.1	Wheat	cytosol	36.21	42.67
TraesCS1D01G433500.1	Wheat	cytosol	35.36	42.44
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	38.47	42.11
CDX93597	Canola	cytosol	38.19	41.99
GSMUA_Achr2P11780_001	Banana	golgi	28.01	41.95
CDX95099	Canola	cytosol	33.1	41.64
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	37.62	38.95
TraesCS4D01G339300.1	Wheat	cytosol	40.45	38.18
TraesCS2D01G459400.1	Wheat	mitochondrion	27.58	37.21
TraesCS4D01G351600.1	Wheat	plastid	29.0	36.16
TraesCS5D01G016400.1	Wheat	cytosol	19.09	27.89
TraesCS5D01G016600.1	Wheat	cytosol	20.23	27.34
TraesCS7D01G434400.1	Wheat	cytosol	19.52	26.49
TraesCS7D01G010200.1	Wheat	cytosol	19.24	25.95
TraesCS3D01G516600.1	Wheat	cytosol	18.67	25.29
TraesCS5D01G182800.1	Wheat	cytosol, plastid	18.39	22.89
TraesCS2D01G043700.1	Wheat	peroxisome	23.76	22.02
Bra018663.1-P	Field mustard	nucleus	37.77	20.24
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	19.09	18.54
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	18.53	17.7
TraesCS5D01G016700.1	Wheat	mitochondrion	18.95	15.6

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF00092	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234
PANTHER:PTHR10579	PANTHER:PTHR10579:SF54	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850
EnsemblPlantsGene:TraesCS4D01G339200	EnsemblPlants:TraesCS4D01G339200.1	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
TIGR:cd01466	SEG:seg	InterPro:vWFA_dom_sf	:	:	:

Description

No Description!

Coordinates

chr4D:-:497128609..497133007

Molecular Weight (calculated)

76575.7 Da

IEP (calculated)

6.949

GRAVY (calculated)

-0.293

Length

707 amino acids

Sequence
(BLAST)

001: MADAWGRAKR ALATKLCIRL PDRQRALEDA PPPPPPGREA HHPTTAVEAG PATGEEKARS PSVSSRRLSS SGSRGSKRVC AICLGSMRTG HGQALFTAEC
101: SHKFHFHCIT SNVRHGNHIC PICRADWKEL PFQGPQLADA THGRARVSPV NWPQDDGHMA VIRRLSNSYS GNLLEQFPVF RTPEADIFND DEQIDIQSET
201: VEDSNAVTGS VEIKTYAEVQ AIQQSVTQKV FSILIHLKAP KSLESVSSRA PLDLVTVLDV SGSMKGAKLA LLKKAMGFVI QTLGPNDRLS VIAFSSTARR
301: LFPLRQMNVN GRMQAMHAVN SLVDGGGTNI SDGLKKGAKV IEHRRLKNPV CSIILLSDGQ DTYSVPTFDD GVQTNHSMLV PPSILPGTGN HVQIHTFGFG
401: ADHDSAAMHA IAETSSGTFS FIDAEGSIQN GFAQCIGGLL SVVVKEMRLG VECVDEGVVL TSIKSGGYAS EVAVDGRNGS VDIGDLYADE ERGFLITLHV
501: PAAQGQQTVL IKPSCTYQDA VTTESIQVHG SEVSVERPAY SVDCKMSPEV EREWHRVQAM EDMSAARAAA DGGDFSQAVS ILEGRTRILE SQAAQSSDSQ
601: CLALITELRE MQERVESRRR YDESGRAFML AGLSSHSWQR ATARGDSTEL NTQIHTYQTP SMVDMLHRSQ TLVPAVVEML NRSPTVAPSR GSGRSVRSTK
701: SFSERLA

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.