Factsheet for TraesCS7D01G418800.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:

cytosol 1
mitochondrion 1
plasma membrane 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plasma membrane
Any Predictor:	cytosol, peroxisome, plasma membrane
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	96.15	96.15
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	94.92	95.31
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	81.73	82.64
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	56.87	55.95
HORVU0Hr1G022100.1	Barley	cytosol	51.79	52.43
Zm00001d024014_P001	Maize	cytosol	28.3	40.95
Zm00001d024886_P002	Maize	cytosol	28.98	40.89
TraesCS7D01G434400.1	Wheat	cytosol	27.2	38.0
TraesCS7D01G010200.1	Wheat	cytosol	27.06	37.6
TraesCS3D01G516600.1	Wheat	cytosol	26.92	37.55
TraesCS5D01G016400.1	Wheat	cytosol	23.49	35.33
TraesCS5D01G016600.1	Wheat	cytosol	24.18	33.65
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	17.58	22.54
TraesCS5D01G472700.1	Wheat	cytosol	18.13	22.0
TraesCS1D01G433500.1	Wheat	cytosol	17.31	21.39
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	18.13	20.43
TraesCS2D01G459400.1	Wheat	mitochondrion	14.7	20.42
TraesCS4D01G351600.1	Wheat	plastid	14.97	19.22
TraesCS4D01G339200.1	Wheat	mitochondrion	18.54	19.09
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	17.58	18.74
TraesCS4D01G339300.1	Wheat	cytosol	19.09	18.56
TraesCS6D01G207700.2	Wheat	mitochondrion	17.72	18.17
TraesCS2D01G361900.1	Wheat	mitochondrion	17.17	18.06
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	17.45	17.21
TraesCS5D01G016700.1	Wheat	mitochondrion	16.76	14.2
TraesCS2D01G043700.1	Wheat	peroxisome	13.19	12.58
TraesCS5D01G182800.1	Wheat	cytosol, plastid	9.34	11.97

Protein Annotations

EnsemblPlants:TraesCS7D01G418800.1	EnsemblPlantsGene:TraesCS7D01G418800	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092	PFscan:PS50234	SEG:seg
SMART:SM00327	SUPFAM:SSF53300	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7D:-:538370376..538374227

Molecular Weight (calculated)

81109.8 Da

IEP (calculated)

9.656

GRAVY (calculated)

-0.374

Length

728 amino acids

Sequence
(BLAST)

001: MSSDFDEDQN VPYAHPPDGP PLLDRADNVR FRWHASDRAP LHENRQQVLL EVHDASSAAA SDRLGLDLVA VLDVSKSMRK KDRLGKMKTA MHFVINKLGP
101: KDRLSIVKFS EEAERLCPLL SVTPANKPHL MAIVDGLQVI DPTNIRDGLE TALGVLGRRR ISGGRLASIF LLSDGDENIG HATNVDVSDV PVYTFGFGTD
201: FDPKVLDEIA RRSKGGTFNF VDDGENMTEP FSQILGGLLS VVVQDLKLIV SPQPGDSILE DVDSRLYQQT RDDNSGAVIV HFGDLFAGEI RRVIAHIRLP
301: AVGQKKNATA ITAQCSYSIR GQPFYSRRLP VPIRRTPTGS ADPSRTMPVA LRTERARRHH VTFLDEVRTM ADGGDLHGAQ GKLVEARNDL AHEQSNPMID
401: FLRATLDKLL GLITSPGQHA GFRAYLRSLR TSHDRERVAA TGDVKGVRLF ETRHTSAFRG QAKRFEKQAT MGHRPPAHHD SNFNEDDDDT HRLRDREEGR
501: TRTRMERPVA VEARNNRPWK TWWGDDDKHR WSSARSTSAC AWVLCILCVL LVIGAIVLGI LLFAVYNHKM PYLAVADAQL GALQYAGQDG TVQNLQLSIA
601: FLAINKDSRA DASFSRVNLA LKLQGVDMLL FRAPPFVVPP DSSMPLQYND VVSTGRRLDK AGMRSMDKSL NAGVVPFDLH GKVRTRGNTG IFQNTQFWTR
701: FSCRLRFFFP GNGTVIPADR RSCRSRWP

Best Arabidopsis Sequence Match ( AT3G54780.1 )
(BLAST)

001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.