Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7A01G426800.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.92 | 82.34 |
| TraesCS7B01G327100.1 | Wheat | cytosol, peroxisome, plasma membrane | 83.19 | 82.28 |
| TraesCS7D01G418800.1 | Wheat | cytosol, peroxisome, plasma membrane | 82.64 | 81.73 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 61.67 | 61.75 |
| Zm00001d024014_P001 | Maize | cytosol | 27.92 | 39.96 |
| Zm00001d024886_P002 | Maize | cytosol | 28.33 | 39.53 |
| HORVU7Hr1G001030.5 | Barley | cytosol | 27.08 | 37.14 |
| HORVU5Hr1G001270.2 | Barley | cytosol | 18.47 | 37.05 |
| HORVU4Hr1G084370.1 | Barley | cytosol | 8.33 | 34.48 |
| HORVU0Hr1G036570.1 | Barley | mitochondrion | 17.36 | 32.72 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 11.11 | 32.52 |
| HORVU5Hr1G070100.1 | Barley | cytosol | 23.61 | 32.38 |
| HORVU5Hr1G001450.1 | Barley | cytosol | 23.61 | 32.38 |
| HORVU4Hr1G001800.2 | Barley | cytosol | 17.5 | 27.33 |
| HORVU5Hr1G076190.1 | Barley | cytosol, peroxisome | 17.92 | 24.86 |
| HORVU1Hr1G092690.1 | Barley | cytosol | 15.97 | 20.57 |
| HORVU1Hr1G038870.1 | Barley | plastid | 18.06 | 20.34 |
| HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 17.92 | 18.12 |
| HORVU4Hr1G084340.1 | Barley | mitochondrion | 17.64 | 17.96 |
| HORVU4Hr1G084330.1 | Barley | cytosol | 18.61 | 17.72 |
| HORVU0Hr1G005150.3 | Barley | cytosol, vacuole | 17.78 | 17.44 |
| HORVU2Hr1G088110.4 | Barley | cytosol, mitochondrion | 16.67 | 17.14 |
| HORVU6Hr1G088580.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 17.5 | 16.98 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 10.56 | 13.5 |
| HORVU2Hr1G118990.1 | Barley | cytosol | 16.94 | 13.29 |
Protein Annotations
| EnsemblPlants:HORVU7Hr1G098290.1 | EnsemblPlantsGene:HORVU7Hr1G098290 | Gene3D:3.40.50.410 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A | InterPro:vWFA_dom_sf | ncoils:Coil | PANTHER:PTHR10579 |
| PANTHER:PTHR10579:SF64 | PFAM:PF00092 | PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 |
| TMHMM:TMhelix | UniParc:UPI000B4747D5 | UniProt:A0A287XIF1 | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chrchr7H:-:596984391..596989385
Molecular Weight (calculated)
80026.1 Da
IEP (calculated)
9.605
GRAVY (calculated)
-0.318
Length
720 amino acids
Sequence
(BLAST)
(BLAST)
001: MASDFDEDQN VPYAHPAGPP ALDRADNVRL RGHASDRAPL HENRQQVLLE VIDASSAGGD RRLGLDLVAV LDVSKSMRKN DRLGKMKTAM HFVINKLGHM
101: DRLSIVKFSE EAERLCPLLS VTPPNKARLN HLVDGLQVID PTNIRDGLEA GLSVLAGRRI TGGRVASIFL LSDGDENRGH ATTVDVSDVP VYTFGFGTDY
201: DPKVLDEIAR RSKGGTFNFV DDEENMTEPF SQILGGLLSI VVQDLKLIVS PQRGESIIEG VDSRLYQQTW DAGSGSITVH FGDLFAGEVR RVIVHISLPE
301: VNQKKDVTAI IAQCSYSVRG QPLYSRGLAV PMRRTPTGSA DLSRMRPVAL RNELARGRHV TFLEEARTLA DNNDLHGADG KLVEARNDLA PEQSNSMIHT
401: LRAALDKLLE MIRSPGGPRA GFAAYLRSLK TSHDRERVSA TGDVKGVRLF ETRHTSAFRG QAKRFEKQST MGRRPAPHEF KEEEEDANRL REEDGRMERR
501: PVLVEARSGL WKTWWGDDDK QHRRSARSTS ACAWVMCILC LLLIVGLIVL GVLLFAVYNH KMPYLAVAGA QLGALQYDGQ AGTVQNLQIS IAFLAINRDS
601: KADAYFSRVN LALQLHGVDM LLLRAPPFVV PPDTSMPLQY NDVVSTGRRL DKAGMRSMDK SLNAGVVPFD LRGKVRMRGK TGIFQNTQFW TRFSCRLRFF
701: FPGNGTVMPV DRRSCRSRWP
101: DRLSIVKFSE EAERLCPLLS VTPPNKARLN HLVDGLQVID PTNIRDGLEA GLSVLAGRRI TGGRVASIFL LSDGDENRGH ATTVDVSDVP VYTFGFGTDY
201: DPKVLDEIAR RSKGGTFNFV DDEENMTEPF SQILGGLLSI VVQDLKLIVS PQRGESIIEG VDSRLYQQTW DAGSGSITVH FGDLFAGEVR RVIVHISLPE
301: VNQKKDVTAI IAQCSYSVRG QPLYSRGLAV PMRRTPTGSA DLSRMRPVAL RNELARGRHV TFLEEARTLA DNNDLHGADG KLVEARNDLA PEQSNSMIHT
401: LRAALDKLLE MIRSPGGPRA GFAAYLRSLK TSHDRERVSA TGDVKGVRLF ETRHTSAFRG QAKRFEKQST MGRRPAPHEF KEEEEDANRL REEDGRMERR
501: PVLVEARSGL WKTWWGDDDK QHRRSARSTS ACAWVMCILC LLLIVGLIVL GVLLFAVYNH KMPYLAVAGA QLGALQYDGQ AGTVQNLQIS IAFLAINRDS
601: KADAYFSRVN LALQLHGVDM LLLRAPPFVV PPDTSMPLQY NDVVSTGRRL DKAGMRSMDK SLNAGVVPFD LRGKVRMRGK TGIFQNTQFW TRFSCRLRFF
701: FPGNGTVMPV DRRSCRSRWP
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.