Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
| Predictors | GFP | MS/MS | Papers | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G433500.1 | Wheat | cytosol | 81.4 | 77.25 |
| TraesCS1B01G456800.1 | Wheat | cytosol | 81.75 | 75.79 |
| TraesCS7A01G423300.1 | Wheat | cytosol | 72.09 | 68.07 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 28.98 | 65.85 |
| HORVU4Hr1G084370.1 | Barley | cytosol | 20.04 | 64.37 |
| HORVU5Hr1G076190.1 | Barley | cytosol, peroxisome | 50.45 | 54.34 |
| HORVU1Hr1G038870.1 | Barley | plastid | 56.17 | 49.14 |
| HORVU0Hr1G005150.3 | Barley | cytosol, vacuole | 52.24 | 39.78 |
| HORVU4Hr1G084330.1 | Barley | cytosol | 53.49 | 39.55 |
| HORVU4Hr1G084340.1 | Barley | mitochondrion | 42.04 | 33.24 |
| HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 41.14 | 32.3 |
| HORVU2Hr1G088110.4 | Barley | cytosol, mitochondrion | 39.89 | 31.86 |
| Os10t0464800-00 | Rice | nucleus | 54.02 | 31.82 |
| HORVU6Hr1G088580.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 39.18 | 29.51 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 28.26 | 28.06 |
| HORVU5Hr1G001270.2 | Barley | cytosol | 17.89 | 27.86 |
| HORVU7Hr1G001030.5 | Barley | cytosol | 23.26 | 24.76 |
| HORVU4Hr1G001800.2 | Barley | cytosol | 19.86 | 24.08 |
| HORVU5Hr1G070100.1 | Barley | cytosol | 21.29 | 22.67 |
| HORVU5Hr1G001450.1 | Barley | cytosol | 21.29 | 22.67 |
| HORVU0Hr1G036570.1 | Barley | mitochondrion | 15.21 | 22.25 |
| HORVU7Hr1G098290.1 | Barley | cytosol, peroxisome, plasma membrane | 20.57 | 15.97 |
| HORVU2Hr1G118990.1 | Barley | cytosol | 22.9 | 13.94 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 10.91 | 8.48 |
Protein Annotations
| Gene3D:3.30.40.10 | Gene3D:3.40.50.410 | MapMan:35.1 | UniProt:A0A287GRP6 | EnsemblPlantsGene:HORVU1Hr1G092690 | EnsemblPlants:HORVU1Hr1G092690.1 |
| InterPro:IPR001841 | InterPro:IPR002035 | InterPro:IPR013083 | InterPro:IPR036465 | PFAM:PF00092 | PFAM:PF17123 |
| PFscan:PS50089 | PFscan:PS50234 | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 | SMART:SM00184 | SMART:SM00327 |
| SUPFAM:SSF53300 | SUPFAM:SSF57850 | UniParc:UPI000B46DC58 | InterPro:VWF_A | InterPro:Znf_RING | InterPro:Znf_RING/FYVE/PHD |
| SEG:seg | InterPro:vWFA_dom_sf | : | : | : | : |
Description
No Description!
Coordinates
chrchr1H:-:551354171..551355847
Molecular Weight (calculated)
59364.2 Da
IEP (calculated)
5.599
GRAVY (calculated)
-0.092
Length
559 amino acids
Sequence
(BLAST)
(BLAST)
001: MAEDADVCAI CLGGMVRGQA GFTAECSHAF HLSCISASVA HGNHDCPLCK APWTVLPAVN APPSPPSSSQ QVRRTYQDDE PTVPAQPAAA NNGGSGAAVA
101: LRTHCEFPAL ARDVAREKFA VLVHARAPSS EAARASLDLV TVLDVSGSMA GQKLALLKRA MGFVIDNLGP ADRLSVVSFS NNASRLIRLA RMSDAGKAAA
201: KRAVESLYAR GATNIGEGLR VAADVLDCRR HVNAVAGVML LSDGQDSFTG ANYINLMPPS LSEYNGAGVR PPAVHTFGFG TDHDAAAMHT IAEATGGTFS
301: FIENQAIVQD AFAQCIGGLL TVVVQEARIA MTCLHTGVRV REIKSGRYDS HVDADGRAAS VDVGELYADE ERRFLILMDV PRAEEAEDVT GLVKVSCTYQ
401: DAATGQAATV SVDDAAVQRP VEATEVEPSM EVERERLRVA TTEDMAAARE AADRGEHAEG GRILRRRLAA VKSSAHAFDD LCCEELEEEM HDFIGFVEDD
501: KEYKTKGRAC ILPALARTGS SAPGWILLGL SLAAAGVRLT PLRQWRGWSR SHASSGTWQ
101: LRTHCEFPAL ARDVAREKFA VLVHARAPSS EAARASLDLV TVLDVSGSMA GQKLALLKRA MGFVIDNLGP ADRLSVVSFS NNASRLIRLA RMSDAGKAAA
201: KRAVESLYAR GATNIGEGLR VAADVLDCRR HVNAVAGVML LSDGQDSFTG ANYINLMPPS LSEYNGAGVR PPAVHTFGFG TDHDAAAMHT IAEATGGTFS
301: FIENQAIVQD AFAQCIGGLL TVVVQEARIA MTCLHTGVRV REIKSGRYDS HVDADGRAAS VDVGELYADE ERRFLILMDV PRAEEAEDVT GLVKVSCTYQ
401: DAATGQAATV SVDDAAVQRP VEATEVEPSM EVERERLRVA TTEDMAAARE AADRGEHAEG GRILRRRLAA VKSSAHAFDD LCCEELEEEM HDFIGFVEDD
501: KEYKTKGRAC ILPALARTGS SAPGWILLGL SLAAAGVRLT PLRQWRGWSR SHASSGTWQ
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.