Factsheet for TraesCS1D01G433500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1B01G456800.1	Wheat	cytosol	91.68	89.55
HORVU1Hr1G092690.1	Barley	cytosol	77.25	81.4
TraesCS7A01G423300.1	Wheat	cytosol	74.02	73.65
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	52.46	54.4
TraesCS5D01G472700.1	Wheat	cytosol	53.14	52.17
TraesCS2D01G459400.1	Wheat	mitochondrion	43.46	48.85
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	55.52	47.88
TraesCS4D01G351600.1	Wheat	plastid	44.82	46.56
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	50.76	46.28
TraesCS4D01G339300.1	Wheat	cytosol	52.97	41.66
TraesCS4D01G339200.1	Wheat	mitochondrion	42.44	35.36
TraesCS2D01G361900.1	Wheat	mitochondrion	41.26	35.12
TraesCS6D01G207700.2	Wheat	mitochondrion	42.11	34.93
Os10t0464800-00	Rice	nucleus	54.84	34.04
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	40.92	32.66
TraesCS7D01G010200.1	Wheat	cytosol	23.94	26.91
TraesCS5D01G016400.1	Wheat	cytosol	20.88	25.41
TraesCS7D01G434400.1	Wheat	cytosol	22.41	25.34
TraesCS5D01G016600.1	Wheat	cytosol	22.07	24.86
TraesCS3D01G516600.1	Wheat	cytosol	21.05	23.75
TraesCS2D01G043700.1	Wheat	peroxisome	25.81	19.92
TraesCS5D01G182800.1	Wheat	cytosol, plastid	17.15	17.78
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	22.24	17.7
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	21.39	17.31
TraesCS5D01G016700.1	Wheat	mitochondrion	20.54	14.09

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF13768	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234
PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850
EnsemblPlantsGene:TraesCS1D01G433500	EnsemblPlants:TraesCS1D01G433500.1	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
TIGR:cd01466	TIGR:cd16448	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chr1D:+:482896065..482897873

Molecular Weight (calculated)

62206.4 Da

IEP (calculated)

7.071

GRAVY (calculated)

-0.283

Length

589 amino acids

Sequence
(BLAST)

001: MADADADADV CAICLGGMVR GQAGFTAECS HAFHLRCISA SVAHGNHDCP LCKAPWTVLP AVNAPPPSSS SSSRQVRRTY QDDEPTVPAQ AAAANNGGSG
101: AGVVLRTHCE FPALARGAAR EHFAVLVHAK APSSEAARAS LDLVTVLDVS GSMAGSKLAL LKKAMGFVID NLGPADRLSV VSFSNNASRL IRLSRMSDTG
201: KAAAKQAVGS LVANGATNIG EGLRVAADVL DCRRHVNAVA SIMLLSDGQD TYTAAGGDAA DYITLGYNGA GVRPPAVHTF GFGTDHDAAA MHTIAEATGG
301: TFSFIQNQAI VQDAFAQCIG GLLTVVVQEA RLAVTCLHPG VRVREVKSGR YDSHVDDDGR ASSVDVGELY ADEERRFLIL MDVPTAEDAE EVTGLVKVSC
401: TYQDAATGQA ATVDGDDAVV QRPVEVTGVE PSMEVERERL RVAATEDMAA AREAADRGEH AEGGRILRRR VAAMKCSARA HKDLDCEELE DEMHDYIGLV
501: EDRQQYQKFG HARILSGMSS HRKQRAATVG KAPGSGRAAY ATPAMKKMVD KSREQRQTAA APAPQPKRKH GRGQQPDSKS GTGKRHKKH

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.