Factsheet for TraesCS1B01G456800.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS1D01G433500.1	Wheat	cytosol	89.55	91.68
HORVU1Hr1G092690.1	Barley	cytosol	75.79	81.75
TraesCS7A01G423300.1	Wheat	cytosol	71.64	72.97
TraesCS5B01G284200.1	Wheat	cytosol	47.1	56.69
TraesCS3B01G425600.1	Wheat	cytosol	37.15	54.5
TraesCS2B01G515000.1	Wheat	cytosol	47.43	54.17
TraesCS5B01G338500.1	Wheat	cytosol	45.94	54.1
TraesCS1B01G164800.1	Wheat	cytosol, nucleus, peroxisome	53.73	50.94
TraesCS2B01G377900.1	Wheat	cytosol	50.75	47.37
TraesCS4B01G358100.1	Wheat	plastid	54.06	45.79
TraesCS4B01G344200.1	Wheat	cytosol	52.74	44.11
TraesCS2B01G382300.1	Wheat	mitochondrion	41.13	35.68
TraesCS4B01G344100.1	Wheat	mitochondrion	41.79	35.64
TraesCS6B01G254400.1	Wheat	mitochondrion	41.63	35.35
Os10t0464800-00	Rice	nucleus	54.06	34.35
TraesCS6B01G413100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	40.46	33.02
TraesCS5B01G009400.1	Wheat	cytosol	20.56	25.94
TraesCS5B01G009600.1	Wheat	cytosol	21.56	24.76
TraesCS3B01G577600.1	Wheat	cytosol	20.73	23.86
TraesCS2B01G057300.1	Wheat	peroxisome	25.04	19.61
TraesCS5B01G176000.2	Wheat	mitochondrion	17.08	19.54
TraesCS2B01G026900.1	Wheat	cytosol	18.74	18.86
TraesCS7B01G344600.1	Wheat	mitochondrion	10.28	17.66
TraesCS6B01G057500.1	Wheat	cytosol	14.59	17.46
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	20.56	17.03
TraesCS5B01G009700.1	Wheat	mitochondrion	21.39	15.02

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083
InterPro:IPR036465	PFAM:PF00092	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234
PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850
EnsemblPlantsGene:TraesCS1B01G456800	EnsemblPlants:TraesCS1B01G456800.1	InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD
TIGR:cd01466	TIGR:cd16448	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chr1B:+:671225038..671226849

Molecular Weight (calculated)

63913.7 Da

IEP (calculated)

7.602

GRAVY (calculated)

-0.314

Length

603 amino acids

Sequence
(BLAST)

001: MRRPKPSSAA PMADADADVC AICLGAMLRG QAGFTAECSH AFHLNCISAS VAHGNHDCPL CKAPWTVLPA VNAPRASSSQ QLVRRAYQDD EPTVPAQAAA
101: ENNGGSGAAA VVIRTHCEVP ALARGAAREN FAVLVHAKAP SSEAARASLD LVTVLDVSGS MAGSKLALLK RAMGFVIDNL GPADRLSVVS FSNNASRLIR
201: LARMSDAGKA AAKQAVESLF ANGGTNIGEG LRVAADVLDC RRHMNAVASI MLLSDGQDTY NGADYITLVP PSLRGYNGAG VRPPAVHTFG FGTDHDAAAM
301: HTIAEATGGT FSFIQNQAIV QDAFAQCIGG LLTVVVQEAR IAVTCLHPGV RVREVKSGRY DSHVDADGRA SSVDVGELYA DEERRFLLLM DVPTAEDAEE
401: VTGLLKVSCT YQDAATGQAA TVDGDDAVVQ RPVEATEVEP SMEVERERLR VAATEDMAAA REAADRGEHA EGGRILRRRL GAMKGSARAH KDLDCEELED
501: EMHDFIGLVE DRQQYQKFGH ARILSGMSSH RNQRAATLGK PPGGRGGRGR GAAYATPAMK KMVDKSREQR QTAAAPAPQP KRKHGRGQQP DSKSGTGKRH
601: KKH

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.