Subcellular Localization
min:
: max
Winner_takes_all: peroxisome, cytosol, plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- mitochondrion 1
- plasma membrane 1
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS7D01G418800.1 | Wheat | cytosol, peroxisome, plasma membrane | 96.15 | 96.15 |
| TraesCS7A01G426800.1 | Wheat | cytosol, peroxisome, plasma membrane | 94.78 | 95.17 |
| HORVU7Hr1G098290.1 | Barley | cytosol, peroxisome, plasma membrane | 82.28 | 83.19 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 51.79 | 52.43 |
| TraesCS3B01G577600.1 | Wheat | cytosol | 25.82 | 35.88 |
| TraesCS5B01G009400.1 | Wheat | cytosol | 21.7 | 33.05 |
| TraesCS5B01G009600.1 | Wheat | cytosol | 23.49 | 32.57 |
| TraesCS7B01G344600.1 | Wheat | mitochondrion | 15.52 | 32.19 |
| TraesCS2B01G026900.1 | Wheat | cytosol | 23.63 | 28.71 |
| TraesCS5B01G284200.1 | Wheat | cytosol | 16.21 | 23.55 |
| TraesCS2B01G515000.1 | Wheat | cytosol | 16.62 | 22.92 |
| TraesCS6B01G057500.1 | Wheat | cytosol | 15.25 | 22.02 |
| TraesCS3B01G425600.1 | Wheat | cytosol | 12.09 | 21.41 |
| TraesCS5B01G338500.1 | Wheat | cytosol | 14.56 | 20.7 |
| TraesCS1B01G456800.1 | Wheat | cytosol | 17.03 | 20.56 |
| TraesCS2B01G377900.1 | Wheat | cytosol | 17.72 | 19.97 |
| TraesCS1B01G164800.1 | Wheat | cytosol, nucleus, peroxisome | 17.31 | 19.81 |
| TraesCS4B01G344200.1 | Wheat | cytosol | 18.54 | 18.72 |
| TraesCS4B01G344100.1 | Wheat | mitochondrion | 17.86 | 18.39 |
| TraesCS2B01G382300.1 | Wheat | mitochondrion | 17.17 | 17.99 |
| TraesCS6B01G254400.1 | Wheat | mitochondrion | 17.45 | 17.89 |
| TraesCS4B01G358100.1 | Wheat | plastid | 16.9 | 17.28 |
| TraesCS6B01G413100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 17.17 | 16.91 |
| TraesCS5B01G009700.1 | Wheat | mitochondrion | 17.03 | 14.44 |
| TraesCS5B01G176000.2 | Wheat | mitochondrion | 9.34 | 12.9 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 13.32 | 12.6 |
Protein Annotations
| EnsemblPlants:TraesCS7B01G327100.1 | EnsemblPlantsGene:TraesCS7B01G327100 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | PFAM:PF00092 | PFscan:PS50234 | SEG:seg |
| SMART:SM00327 | SUPFAM:SSF53300 | TMHMM:TMhelix | MapMan:35.1 | : | : |
Description
No Description!
Coordinates
chr7B:-:580977402..580980719
Molecular Weight (calculated)
81068.9 Da
IEP (calculated)
9.415
GRAVY (calculated)
-0.375
Length
728 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSDFDEDQD VPYAHPRDGP PLLDRADMVR FRWHASDRAP LHENRQQVLL EVHDASSSAA GDRLGIDLVA VLDVSKSMRK KDRLGKMKTA MHFVINKLGP
101: KDRLSIVKFS EEAERLCPLL SVTPDNKPHL MDIVDGLQVI DPTNIRDGLE TALGVLGRRR ISGGRVASIF LLSDGDENIG HATNVDVSDV PVYTFGFGTD
201: FDPKVLDEIA RRSKGGTFNF VDDGENMTEP FSQILGGLLS IVVQDLKLIV SPQPGDSILE DVDSRLYQQT RDDNSGAVIV HFGDLFAGEI RRVIAHIRLP
301: AVGQKKNATA IIAQCSYSVR GQPFYSRRLP VPMRRTPTGS ADPSRTMPVA LRTERARRHH VTFLDEVRTM ADGDDLHGAQ GKLVEARNDL AHEQSNPMID
401: FLRATLDKLL GLITSPGQHA GFRAYLRSLR TSHDRERVAA TGDVKGVRLF ETRHTSAFRG QAKRFEKQAT MGHRPPAHHD SNFNEEDDDT NRLREREEGR
501: TRMERPVAVE ARGGPWKTWW GDDDKGGWRR RSSARSTSAC AWVLCILCVL LVIGAIVLGV LLFAVYNHKM PYLAVADAQL GALQYAGKDG TVQNLQLSIA
601: FLAINKDSRA DASFSRVNLA LKLQGVDMLL FRAPPFVVPP DSSMPLQYND VVSTGRRLDK AGMRSMDKSL NAGVVPFDLH GKVRTRGNTG IFQNTKFWTR
701: FSCRLHFFFP GNGTVIPADR RSCRSRWP
101: KDRLSIVKFS EEAERLCPLL SVTPDNKPHL MDIVDGLQVI DPTNIRDGLE TALGVLGRRR ISGGRVASIF LLSDGDENIG HATNVDVSDV PVYTFGFGTD
201: FDPKVLDEIA RRSKGGTFNF VDDGENMTEP FSQILGGLLS IVVQDLKLIV SPQPGDSILE DVDSRLYQQT RDDNSGAVIV HFGDLFAGEI RRVIAHIRLP
301: AVGQKKNATA IIAQCSYSVR GQPFYSRRLP VPMRRTPTGS ADPSRTMPVA LRTERARRHH VTFLDEVRTM ADGDDLHGAQ GKLVEARNDL AHEQSNPMID
401: FLRATLDKLL GLITSPGQHA GFRAYLRSLR TSHDRERVAA TGDVKGVRLF ETRHTSAFRG QAKRFEKQAT MGHRPPAHHD SNFNEEDDDT NRLREREEGR
501: TRMERPVAVE ARGGPWKTWW GDDDKGGWRR RSSARSTSAC AWVLCILCVL LVIGAIVLGV LLFAVYNHKM PYLAVADAQL GALQYAGKDG TVQNLQLSIA
601: FLAINKDSRA DASFSRVNLA LKLQGVDMLL FRAPPFVVPP DSSMPLQYND VVSTGRRLDK AGMRSMDKSL NAGVVPFDLH GKVRTRGNTG IFQNTKFWTR
701: FSCRLHFFFP GNGTVIPADR RSCRSRWP
001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
Arabidopsis Description
Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.