Factsheet for HORVU0Hr1G022100.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	61.75	61.67
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	52.85	52.41
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	52.43	51.79
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	52.43	51.79
HORVU4Hr1G084370.1	Barley	cytosol	5.56	22.99
Zm00001d024014_P001	Maize	cytosol	14.46	20.68
Zm00001d024886_P002	Maize	cytosol	14.6	20.35
HORVU5Hr1G001270.2	Barley	cytosol	10.01	20.06
HORVU7Hr1G001030.5	Barley	cytosol	13.77	18.86
HORVU5Hr1G001450.1	Barley	cytosol	12.93	17.71
HORVU5Hr1G070100.1	Barley	cytosol	12.93	17.71
HORVU0Hr1G036570.1	Barley	mitochondrion	9.18	17.28
HORVU4Hr1G086310.1	Barley	cytosol	5.84	17.07
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	9.46	13.1
HORVU4Hr1G001800.2	Barley	cytosol	7.93	12.36
HORVU1Hr1G092690.1	Barley	cytosol	8.48	10.91
HORVU4Hr1G084380.2	Barley	cytosol	8.21	10.48
HORVU1Hr1G038870.1	Barley	plastid	9.04	10.17
HORVU4Hr1G084340.1	Barley	mitochondrion	9.04	9.19
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	9.04	8.76
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	8.9	8.72
HORVU4Hr1G084330.1	Barley	cytosol	9.04	8.6
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	8.21	8.29
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	7.51	7.71
HORVU2Hr1G118990.1	Barley	cytosol	8.62	6.75

Protein Annotations

EnsemblPlants:HORVU0Hr1G022100.1	EnsemblPlantsGene:HORVU0Hr1G022100	Gene3D:3.40.50.410	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A	InterPro:vWFA_dom_sf	ncoils:Coil	PANTHER:PTHR31852
PANTHER:PTHR31852:SF107	PFAM:PF13519	PFscan:PS50234	SEG:seg	SUPFAM:SSF53300	TMHMM:TMhelix
UniParc:UPI000B475470	UniProt:A0A287E771	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchrUn:+:114018166..114022892

Molecular Weight (calculated)

51314.9 Da

IEP (calculated)

10.227

GRAVY (calculated)

-0.210

Length

719 amino acids

Sequence
(BLAST)

001: SFVYTDHGKN SMDHAEGPPA LDRADNVRLR GHASDRAPLH ENRQQVLLEV IDASSAGGDR RLGLDLVAVL DVSKSMRKND RLGKXXXAMH FVINKLGHMD
101: RLSIVKFSEE AERLCPLLSV TPPNKARLNH LVDGLQVIDP TNIRDGLEAG LSVLAGRRIT GGRVASIFLL SDGDENRGHA TTVDVSDVPV XXXXXXXXXX
201: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXVX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
301: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX
401: XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXDRERVSAT GDVKGVRLFE TRHTSAFRGQ AKRFEKQSTM GRRPAPHEFK EEEEDANRLR EEDGRMERRP
501: VLVEARSGLW KTWWGDDDKQ HRRSARSTSA CAWVMCILCL LLIVGLIVLG VLLFAVYNHK MPYLAVAGAQ LEXXXXXXXX XXXXXXXXXI AFLAINRDSK
601: ADAYFSRVNL ALQLHGVDML LLRAPPFVVP PDTSMPLQYN DVVSTGRRLD KAGMRSMDKS LNAGVVPFDL RGKVRMRGKT GIFQNTQFWT RFSCRLRFFF
701: PGNGTVMPVD RRSCRSRWP

Best Arabidopsis Sequence Match ( AT2G38970.1 )
(BLAST)

001: MGTRWRRMKL ALGLNLCTYL PRTLEESPTP LNSTERLSDV ALLSPLNWPM TPTPSSHGLK LSRNSSKSSK TCSICLNKMK EGGGHALFTA ECSHSFHFHC
101: IASNVKHGNQ VCPVCRAKWK EIPMQHPSFD LPYLFARSYN NDAAISLVHR LPRSRGVMNQ GRGLAPEPSM FDDDERLEQQ LVFSGKSYSD ALENNHPVRM
201: MDLKIYPEVS AVPRADSREK FDVLVHLRAA AMVTGNANSL NNQISRYPRA PVDLVTVLDI SGSMAGTKLA LLKRAMGFVI QNLGSNDRLS VIAFSSTARR
301: LFPLTKMSDA GRQRALQAVN SVVANGGTNI AEGLRKGVKV MEDRRDKNPV ASIILLSDGR DTYTMNQADP NYKLLLPLSM HGCESKRFQI PVHSFGFGSD
401: HDASLMHSVS ETSGGTFSFI ESESVIQDAL AQCIGGLLSV AVQELRLEIE GMCSDVHLSS IKAGSYQSLV SGDGRSGCVD IGDLYADEER DFLISVNIPP
501: QKDGNETPLL KMRCVYKDLL TKEIVTLQSH MLKIQRPETV GQEVVVSIEV DRQRNRFLAA EAMVKARALA EREDLAAGVT AIQNFRVALA ETVSAKSGDG
601: FCVALDRELK EMQERMASRH VYEVSGRAYI LSGLSSHSWQ RATSRGESGD GSSFVQAYYQ TPSMVEMLHR SQATSHHHRL IQPLFASQPK PR

Arabidopsis Description

Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:F4IU12]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.