Factsheet for HORVU4Hr1G084380.2

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G084370.1	Barley	cytosol	19.18	62.07
HORVU4Hr1G086310.1	Barley	cytosol	15.63	35.77
EER95529	Sorghum	nucleus	37.83	32.77
HORVU4Hr1G084330.1	Barley	cytosol	43.34	32.28
TraesCS5A01G513100.1	Wheat	cytosol, plastid	27.18	30.97
OQU93258	Sorghum	cytosol	36.23	29.06
HORVU1Hr1G092690.1	Barley	cytosol	28.06	28.26
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	36.77	28.2
Zm00001d027621_P001	Maize	cytosol	36.06	27.14
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	24.51	26.59
HORVU1Hr1G038870.1	Barley	plastid	28.77	25.35
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	28.6	22.61
HORVU4Hr1G084340.1	Barley	mitochondrion	27.35	21.78
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	26.64	21.43
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	28.06	21.29
HORVU5Hr1G001270.2	Barley	cytosol	11.01	17.27
HORVU0Hr1G036570.1	Barley	mitochondrion	9.77	14.4
HORVU7Hr1G001030.5	Barley	cytosol	13.32	14.29
HORVU5Hr1G001450.1	Barley	cytosol	12.97	13.9
HORVU5Hr1G070100.1	Barley	cytosol	12.97	13.9
HORVU4Hr1G001800.2	Barley	cytosol	10.83	13.23
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	13.5	10.56
HORVU0Hr1G022100.1	Barley	cytosol	10.48	8.21
HORVU2Hr1G118990.1	Barley	cytosol	13.14	8.06

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	UniProt:A0A287PXH0	ncoils:Coil	EnsemblPlantsGene:HORVU4Hr1G084380
EnsemblPlants:HORVU4Hr1G084380.2	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	PFAM:PF00092
PFAM:PF17123	PRINTS:PR01217	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72
SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000B47280A	InterPro:VWF_A
InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:	:

Description

No Description!

Coordinates

chrchr4H:+:628493198..628495886

Molecular Weight (calculated)

60086.7 Da

IEP (calculated)

10.159

GRAVY (calculated)

-0.466

Length

563 amino acids

Sequence
(BLAST)

001: MEIPDQTDPC AICLGSMDAA GGQAIFTAGC SHTFHFSCIS AGVCPLCNAP TRGLPFLRPT RPPPPPPPPP PPPRPVQSQP GTHPLRPCIV PPRQPPPVHF
101: VSLIPTQPPT PPPPPPVHSV HGQPPTPLTS SWPRIPTQTR HVHFVHSQPP TPPPPPPVHS VHDQPPTPPT SSWPRIPTQP RQPPPRPAHF VHDHPPPPPP
201: PPPPVRSIRR QPPPPPPPVH SAHGQSSPPM TSSWPRLPTQ LRPPPPPPPP PPVRIRQAQP RMVVFDDDEQ VGPTSGPPAD NPSPVAASNE SVVVNTHIEY
301: PAIARDSSSD NFAVLVHAQA PRMTDTTAAG GDAPRAPVDL VTVLDVSGSM NGYKLALLKQ AMRFVIANLG PDDRLSVVSF STKARRVTRL ARMSEAGKAL
401: SVSAVESLTA GGGTDIAQGL SMAAMVLDQR RHRNAVSSVV LLSDGQDNYI MMRRDGPSGV HANNYEELVP RSFTRTGADG DWSAPIHTFG XSWSRRHASP
501: SRACTPGFVL SPSSPAVTRA ASTRTAALRP FESGNSTPTR RGVSCCFWLC QEPKRPTVTP PLL

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.