Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- cytosol 2
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU5Hr1G001450.1 | Barley | cytosol | 100.0 | 100.0 |
| TraesCS5B01G009600.1 | Wheat | cytosol | 90.86 | 90.86 |
| TraesCS5D01G016600.1 | Wheat | cytosol | 90.48 | 90.82 |
| TraesCS5A01G011700.1 | Wheat | cytosol | 90.1 | 89.92 |
| HORVU5Hr1G001270.2 | Barley | cytosol | 55.62 | 81.34 |
| Os12t0431700-00 | Rice | cytosol | 27.24 | 69.08 |
| HORVU0Hr1G036570.1 | Barley | mitochondrion | 48.57 | 66.75 |
| HORVU7Hr1G001030.5 | Barley | cytosol | 59.05 | 59.05 |
| Zm00001d024886_P002 | Maize | cytosol | 40.76 | 41.47 |
| Zm00001d024014_P001 | Maize | cytosol | 38.86 | 40.56 |
| KXG20893 | Sorghum | cytosol, plastid | 41.71 | 35.84 |
| HORVU4Hr1G084370.1 | Barley | cytosol | 11.05 | 33.33 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 14.1 | 30.08 |
| HORVU4Hr1G001800.2 | Barley | cytosol | 23.81 | 27.11 |
| HORVU5Hr1G076190.1 | Barley | cytosol, peroxisome | 24.57 | 24.86 |
| HORVU7Hr1G098290.1 | Barley | cytosol, peroxisome, plasma membrane | 32.38 | 23.61 |
| HORVU1Hr1G092690.1 | Barley | cytosol | 22.67 | 21.29 |
| HORVU1Hr1G038870.1 | Barley | plastid | 24.95 | 20.5 |
| HORVU4Hr1G084340.1 | Barley | mitochondrion | 27.05 | 20.08 |
| HORVU6Hr1G057680.2 | Barley | cytosol, mitochondrion, nucleus | 26.67 | 19.66 |
| HORVU4Hr1G084330.1 | Barley | cytosol | 27.43 | 19.05 |
| HORVU2Hr1G088110.4 | Barley | cytosol, mitochondrion | 25.33 | 19.0 |
| HORVU6Hr1G088580.4 | Barley | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.52 | 18.06 |
| HORVU0Hr1G005150.3 | Barley | cytosol, vacuole | 24.19 | 17.3 |
| HORVU4Hr1G084380.2 | Barley | cytosol | 13.9 | 12.97 |
| HORVU0Hr1G022100.1 | Barley | cytosol | 17.71 | 12.93 |
| HORVU2Hr1G118990.1 | Barley | cytosol | 20.95 | 11.98 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G070100.1 | EnsemblPlantsGene:HORVU5Hr1G070100 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | PFAM:PF00092 | PFAM:PF14624 |
| PFscan:PS50234 | SMART:SM00327 | SUPFAM:SSF53300 | UniParc:UPI000296D9C2 | UniProt:M0V8Y5 | MapMan:35.2 |
Description
No Description!
Coordinates
chrchr5H:-:526953237..526954907
Molecular Weight (calculated)
56294.6 Da
IEP (calculated)
4.883
GRAVY (calculated)
-0.242
Length
525 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSFHDDEKP SSPNAAGSKD GLVAMAIPAF NRKDVALTKD TVTAMVEISA TLSATMREGL DLVAVLDVSG SMSGDKIESV KKALQFVILK LTPVDRLSIV
101: TFHSTAHRLN PLRSMTHAAQ ADLRAIVNGL VADGGTDIKA GLDVGLAVLA GRVHTESRTP NIFLMSDGQT SGDPRQVNPG EVGVYTFGFG AGTDHKLLSD
201: LANKSIGGTY SAVPDGTNLS APFSQLLGGL LTVVAQDVQL TLEPNNADGD LDKMTVAPGT DYSTTTDQKT GIITIKFGTL FSSEARKVAV NFTLKDSTET
301: EEYDANLAEA RHSYAGQKTR QSPESILIVR TPNPSPVDPS SAGAQQRSVQ AEELRRLHAN TIGAASLLAD AERLPEARHK IMDAQNAVED IMLDDGEKMI
401: NALRAELLQL LTFMESQALY NERGHPYALA TIASHGRQRT AGRGDEGEVI SLYVTPRMIA YLEQAKRFEE NPEEPVPTAD DDVEEEVKND PFGSIAAPLA
501: LYLDTAIQAL KSIKKVLADA SQRKR
101: TFHSTAHRLN PLRSMTHAAQ ADLRAIVNGL VADGGTDIKA GLDVGLAVLA GRVHTESRTP NIFLMSDGQT SGDPRQVNPG EVGVYTFGFG AGTDHKLLSD
201: LANKSIGGTY SAVPDGTNLS APFSQLLGGL LTVVAQDVQL TLEPNNADGD LDKMTVAPGT DYSTTTDQKT GIITIKFGTL FSSEARKVAV NFTLKDSTET
301: EEYDANLAEA RHSYAGQKTR QSPESILIVR TPNPSPVDPS SAGAQQRSVQ AEELRRLHAN TIGAASLLAD AERLPEARHK IMDAQNAVED IMLDDGEKMI
401: NALRAELLQL LTFMESQALY NERGHPYALA TIASHGRQRT AGRGDEGEVI SLYVTPRMIA YLEQAKRFEE NPEEPVPTAD DDVEEEVKND PFGSIAAPLA
501: LYLDTAIQAL KSIKKVLADA SQRKR
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.