Factsheet for HORVU4Hr1G084330.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
iPSORT:	plastid
MultiLoc:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G084370.1	Barley	cytosol	22.62	98.28
TraesCS4B01G344200.1	Wheat	cytosol	83.47	87.52
TraesCS4D01G339300.1	Wheat	cytosol	84.92	85.71
TraesCS5A01G513000.1	Wheat	cytosol	83.6	85.41
EER95529	Sorghum	nucleus	57.14	66.46
HORVU4Hr1G086310.1	Barley	cytosol	21.3	65.45
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	61.64	63.49
OQU93258	Sorghum	cytosol	58.2	62.68
Zm00001d027621_P001	Maize	cytosol	58.2	58.82
HORVU1Hr1G092690.1	Barley	cytosol	39.55	53.49
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	36.51	53.18
HORVU1Hr1G038870.1	Barley	plastid	44.71	52.9
HORVU4Hr1G084380.2	Barley	cytosol	32.28	43.34
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	38.62	41.01
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	37.7	40.71
HORVU4Hr1G084340.1	Barley	mitochondrion	37.43	40.03
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	36.77	37.47
HORVU5Hr1G001450.1	Barley	cytosol	19.05	27.43
HORVU5Hr1G070100.1	Barley	cytosol	19.05	27.43
HORVU7Hr1G001030.5	Barley	cytosol	19.05	27.43
HORVU5Hr1G001270.2	Barley	cytosol	12.83	27.02
HORVU4Hr1G001800.2	Barley	cytosol	15.87	26.03
HORVU0Hr1G036570.1	Barley	mitochondrion	11.9	23.56
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	17.72	18.61
HORVU2Hr1G118990.1	Barley	cytosol	19.18	15.8
HORVU0Hr1G022100.1	Barley	cytosol	8.6	9.04

Protein Annotations

Gene3D:3.30.40.10	Gene3D:3.40.50.410	MapMan:35.1	UniProt:A0A287PXF6	ncoils:Coil	EnsemblPlantsGene:HORVU4Hr1G084330
EnsemblPlants:HORVU4Hr1G084330.1	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR013083	InterPro:IPR036465	PFAM:PF13768
PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72
SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	UniParc:UPI000B4869A2	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:Znf_RING/FYVE/PHD	SEG:seg	InterPro:vWFA_dom_sf	:

Description

No Description!

Coordinates

chrchr4H:+:628312234..628315248

Molecular Weight (calculated)

80340.7 Da

IEP (calculated)

6.029

GRAVY (calculated)

-0.226

Length

756 amino acids

Sequence
(BLAST)

001: STTNVTSTAI INTARTISLP HEASAPFYAA AAPALTCQYQ FSQQPAVSEM EVPDQENPCA ICLGGMAAGG GQATFTAECS HTFHFNCISA SVAHGHLVCP
101: LCNARWRELP FLRPTAPVPP TLPMHAVQPP NEPIASPPMH SGMPPFPAQV PPPTNVHILQ HHQPPPPVHT VQHHQPPLHV PTVVFDDDEQ VEPASGERAD
201: STPAAASTGA VVVNTHAEYP AVARASSTDS FAVLVHVKAP GMADTVAAGS DKPQPRAPLD LVTVLDVSGS MSGHKLALLK QAMRFVIDNL GPDDRLSVVS
301: FSSEARRLTR LARMSDAGKA LSVNAVESLV ARGGTNIAEG LRTAAKVLDE RQHRNAVSSV VLLSDGQDTY TMMRRRGPSG VHAGNYEELV PPSFARTGAD
401: GDWSAPIHTF GFGNDHDAAA MHVIAEATGG TFSFIENEAV IQDAFAQCIG GLLSVVVQEA RIAVSCVHPG VRVVSVKSGR YESHVDEDGR AASVRVGELY
501: ADEERRFLLF LTVPTAEATD GATTALVRVI FSYRNAATGA DVSVTAEDTV VARPEHAPNA SERSVEVERE RVRVEAAEDI AAARAAAERG EHQEAVEILE
601: NRQRALEQSE AGGDGDPMIM ALGAELQEMR GRVSNRQSYL RSGRAYMLAG ISAHQQQRAT SRQMMPEEEQ TAVAARSGVR RMIGRVRSGT AGYMAAAPVA
701: EAATEATMSY ATPAMRAMLL RSRVARGATS AEQGQQQQPM AAEEDAGSSE PKIRST

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.