Factsheet for HORVU4Hr1G084370.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU4Hr1G086310.1	Barley	cytosol	60.92	43.09
TraesCS4B01G344200.1	Wheat	cytosol	94.25	22.75
HORVU4Hr1G084330.1	Barley	cytosol	98.28	22.62
TraesCS5A01G513000.1	Wheat	cytosol	92.53	21.76
TraesCS4D01G339300.1	Wheat	cytosol	93.1	21.63
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	61.49	20.62
EER95529	Sorghum	nucleus	75.29	20.15
HORVU1Hr1G092690.1	Barley	cytosol	64.37	20.04
HORVU4Hr1G084380.2	Barley	cytosol	62.07	19.18
HORVU1Hr1G038870.1	Barley	plastid	68.39	18.62
OQU93258	Sorghum	cytosol	74.71	18.52
HORVU0Hr1G005150.3	Barley	cytosol, vacuole	77.59	18.39
Zm00001d027621_P001	Maize	cytosol	72.99	16.98
HORVU5Hr1G001270.2	Barley	cytosol	29.89	14.48
HORVU0Hr1G036570.1	Barley	mitochondrion	29.89	13.61
HORVU6Hr1G057680.2	Barley	cytosol, mitochondrion, nucleus	55.17	13.48
HORVU2Hr1G088110.4	Barley	cytosol, mitochondrion	54.02	13.43
HORVU6Hr1G088580.4	Barley	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	55.17	12.94
HORVU4Hr1G084340.1	Barley	mitochondrion	52.3	12.87
HORVU7Hr1G001030.5	Barley	cytosol	35.06	11.62
HORVU5Hr1G001450.1	Barley	cytosol	33.33	11.05
HORVU5Hr1G070100.1	Barley	cytosol	33.33	11.05
HORVU4Hr1G001800.2	Barley	cytosol	28.74	10.85
HORVU7Hr1G098290.1	Barley	cytosol, peroxisome, plasma membrane	34.48	8.33
HORVU0Hr1G022100.1	Barley	cytosol	22.99	5.56
HORVU2Hr1G118990.1	Barley	cytosol	27.59	5.23

Protein Annotations

EnsemblPlants:HORVU4Hr1G084370.1	EnsemblPlantsGene:HORVU4Hr1G084370	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	PFAM:PF13768	PFscan:PS50234	SUPFAM:SSF53300
UniParc:UPI000B465607	UniProt:A0A287PYD2	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chrchr4H:+:628460247..628460769

Molecular Weight (calculated)

18206.3 Da

IEP (calculated)

5.582

GRAVY (calculated)

-0.136

Length

174 amino acids

Sequence
(BLAST)

001: RFVIDNLGPD DRLSVVSFSS EARRLTRLAR MSDAGKALSV NAVESLVARG GTNIAEGLRT AAKVLDERQH RNAVSSVVLL SDGQDTYTMM RRRGPSGVHA
101: GNYEELVPPS FARTGADGDW SAPIHTFGFG NDHDAAAMHV IAEATGGTFS FIENEAVIQD AFAQCIGGLL SXXX

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.