Factsheet for TraesCS5A01G011700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G016600.1	Wheat	cytosol	95.25	95.79
TraesCS5B01G009600.1	Wheat	cytosol	94.3	94.48
HORVU5Hr1G070100.1	Barley	cytosol	89.92	90.1
HORVU5Hr1G001450.1	Barley	cytosol	89.92	90.1
TraesCS5A01G011500.1	Wheat	cytosol	78.71	82.8
Os12t0431700-00	Rice	cytosol	27.95	71.01
TraesCS7A01G010300.1	Wheat	nucleus, unclear	60.65	60.88
TraesCS4A01G484700.1	Wheat	cytosol, unclear	60.27	60.5
Zm00001d024886_P002	Maize	cytosol	39.92	40.7
Zm00001d024014_P001	Maize	cytosol	38.4	40.16
KXG20893	Sorghum	cytosol, plastid	42.02	36.17
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	14.83	27.08
TraesCS5A01G513100.1	Wheat	cytosol, plastid	23.38	24.9
TraesCS6A01G006500.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	33.46	24.89
TraesCS3A01G393700.1	Wheat	cytosol	24.33	24.29
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	24.14	24.24
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	32.51	23.59
TraesCS7A01G423300.1	Wheat	cytosol	25.67	22.8
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	26.24	19.83
TraesCS5A01G512800.2	Wheat	mitochondrion	26.62	19.8
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	24.52	19.75
TraesCS5A01G513000.1	Wheat	cytosol	27.38	19.46
TraesCS1A01G421500.1	Wheat	plastid	23.19	19.4
TraesCS6A01G227300.1	Wheat	mitochondrion	25.86	19.13
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	25.1	17.96
TraesCS1A01G146700.1	Wheat	mitochondrion	20.53	16.64
TraesCS5A01G178300.1	Wheat	mitochondrion	13.88	13.85
TraesCS5A01G011800.1	Wheat	plastid	22.24	13.78
TraesCS2A01G045100.1	Wheat	peroxisome	18.82	13.03

Protein Annotations

EnsemblPlants:TraesCS5A01G011700.1	EnsemblPlantsGene:TraesCS5A01G011700	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	ncoils:Coil	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092
PFAM:PF14624	PFscan:PS50234	SEG:seg	SMART:SM00327	SUPFAM:SSF53300	MapMan:35.2

Description

No Description!

Coordinates

chr5A:+:7619251..7620922

Molecular Weight (calculated)

56206.4 Da

IEP (calculated)

4.697

GRAVY (calculated)

-0.276

Length

526 amino acids

Sequence
(BLAST)

001: MALFHDDDKP SSPNNAGSSK DGLVTMAFPA FSRKDVGLTK DAVTAVVEIK ATSSAAMREG LDLVAVLDVS GSMSGDKIES VKKALQFVIM KLTPMDRLSI
101: VTFDSSARRL NPLRSMTQAA QTDLKAIVNG LAAGGGTDIK AGLDLGLAVL GGRVHTESRT PNIFLMSDGQ TSGDPRQVNP GDVAVYTFGF GAGTDHKLLS
201: DLAKKSTGGT YSAVPDGTNL SAPFSQLLGG LLTVVAQDVQ LTLEPNNADG DLDKMTVAPG TDYTTTTDAK SGLITIKFGT LFSGEARKVA VNFTLRDSDE
301: TEEYDATLAE ARHSYAGQKT RQPSENILIV RTPNPSPADP SSAGASQRSV QAEELRRLHA NTIGTASLLA DAEKLAEARE KIMDAQNAVE DIMLDDGERM
401: INALRSELLQ LLTFMESQAL YNERGHPYAL ATIASHGRQR TAGRGDEGEV ISLYVTPRMI AYLEQAKRFE ENPEEPVPTA DDDVEEEIKN DPFGTIAAPL
501: ALYLDAAIQA LQSIKKVLAD ASQRKR

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.