Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5B01G009700.1 | Wheat | mitochondrion | 78.8 | 77.88 |
| TraesCS5D01G016700.1 | Wheat | mitochondrion | 78.68 | 77.76 |
| TraesCS5A01G284900.1 | Wheat | cytosol, mitochondrion, plastid | 9.42 | 27.78 |
| TraesCS5A01G359200.1 | Wheat | cytosol, peroxisome, plastid | 14.25 | 23.09 |
| TraesCS5A01G513100.1 | Wheat | cytosol, plastid | 13.43 | 23.08 |
| TraesCS5A01G011700.1 | Wheat | cytosol | 13.78 | 22.24 |
| TraesCS3A01G393700.1 | Wheat | cytosol | 13.78 | 22.2 |
| TraesCS4A01G484700.1 | Wheat | cytosol, unclear | 13.66 | 22.14 |
| TraesCS7A01G010300.1 | Wheat | nucleus, unclear | 13.55 | 21.95 |
| TraesCS5A01G011500.1 | Wheat | cytosol | 12.6 | 21.4 |
| TraesCS7A01G423300.1 | Wheat | cytosol | 14.37 | 20.61 |
| TraesCS2A01G358400.2 | Wheat | cytosol, nucleus, peroxisome | 14.72 | 19.14 |
| TraesCS5A01G513000.1 | Wheat | cytosol | 16.49 | 18.92 |
| TraesCS1A01G421500.1 | Wheat | plastid | 13.66 | 18.44 |
| TraesCS5A01G512800.2 | Wheat | mitochondrion | 15.31 | 18.39 |
| TraesCS6A01G006500.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 14.96 | 17.96 |
| TraesCS2A01G364100.2 | Wheat | cytosol, mitochondrion | 14.61 | 17.82 |
| TraesCS6A01G227300.1 | Wheat | mitochondrion | 14.72 | 17.58 |
| TraesCS7A01G426800.1 | Wheat | cytosol, peroxisome, plasma membrane | 14.61 | 17.1 |
| TraesCS1A01G146700.1 | Wheat | mitochondrion | 12.25 | 16.02 |
| TraesCS6A01G375500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 13.43 | 15.51 |
| TraesCS5A01G178300.1 | Wheat | mitochondrion | 7.42 | 11.95 |
| TraesCS2A01G045100.1 | Wheat | peroxisome | 9.78 | 10.92 |
| GSMUA_Achr4P06340_001 | Banana | mitochondrion | 0.47 | 2.08 |
Protein Annotations
| EnsemblPlants:TraesCS5A01G011800.1 | EnsemblPlantsGene:TraesCS5A01G011800 | Gene3D:3.40.50.410 | InterPro:DUF4219 | InterPro:IPR002035 | InterPro:IPR036465 |
| InterPro:VWF_A | InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | ncoils:Coil | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 |
| PFAM:PF13768 | PFAM:PF13961 | PFAM:PF14223 | PFAM:PF14624 | PFscan:PS50234 | SEG:seg |
| SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr5A:+:7629139..7633033
Molecular Weight (calculated)
92865.6 Da
IEP (calculated)
8.869
GRAVY (calculated)
-0.248
Length
849 amino acids
Sequence
(BLAST)
(BLAST)
001: MALVKAAASW RSWITHDTTS VKVQAFTASS GVPCEDSRQS FPVMLRVTAE GEAAGSKPPR HVGADIVAVL DISGSMLGDK LERMKEAITN VIDKLGTNDR
101: LSIVSFESNV YRLTELTYMS EQGRRAARDK INELFTKGGT NMGPALHEGA QILRGRPAEE MSSRVGCIVF LSDGLDSGIF EATISPDFPA HTFGLGKDHD
201: PMAMKHIADK TSGTYSYVNK DTKRINYAFQ LFIAGVTSVS VTSVEITLGT PYGILISSIE SGGYSNKMSS DGRSGTIHID NMYAGDRKNF IVFLELPATK
301: QEGKQKVLTV GGHYQGLSVV SKKLTGTDVS VMRPLKKFSD RLVNDPDVAE EVARTKLLKD IGKLFQQQPP NLSGGMPNIY DSFVVSPEGL QAPKTLKSFE
401: GDYNKMMMGI GDPKMHKILG LPYILSWLSS HSWQRATTMD DPCDTPFRTP GQKVVQDAST FVAVGGGSGA TTTGSGGTTA ATSRWEKIIA RAKSNPCSCL
501: LPSVAVTLAV ASLFLAMLYS TLEGSPNPAM KLGPLQYPML TESNYAAWAI KMEAYMRAQG VWDAVGAKDH PKVSARKNQM ALAAIYQAIP EGTLFLLSQK
601: KTAKSAWEAL KTMHIGDQRL RDAKLQTLKL EFEALRMKET DSIDDFAVRL TTVVNKIHTL GERIEEPYTV KKFLRAVPNK HIQIASTIEQ FGDLNTMTLQ
701: EVIGRLKVHE ERLGRLGATE KENELLTRAE WIAREEADQF SHDATKVYAS VAKILLHDAK KENELLMHAE WKAREVVDQL NHDAPKVYAS VAKILLGRSG
801: GGYGGDTYRV SASIAKILDT LLTSAARKER EVKSLIGEAH GDNEVTLRL
101: LSIVSFESNV YRLTELTYMS EQGRRAARDK INELFTKGGT NMGPALHEGA QILRGRPAEE MSSRVGCIVF LSDGLDSGIF EATISPDFPA HTFGLGKDHD
201: PMAMKHIADK TSGTYSYVNK DTKRINYAFQ LFIAGVTSVS VTSVEITLGT PYGILISSIE SGGYSNKMSS DGRSGTIHID NMYAGDRKNF IVFLELPATK
301: QEGKQKVLTV GGHYQGLSVV SKKLTGTDVS VMRPLKKFSD RLVNDPDVAE EVARTKLLKD IGKLFQQQPP NLSGGMPNIY DSFVVSPEGL QAPKTLKSFE
401: GDYNKMMMGI GDPKMHKILG LPYILSWLSS HSWQRATTMD DPCDTPFRTP GQKVVQDAST FVAVGGGSGA TTTGSGGTTA ATSRWEKIIA RAKSNPCSCL
501: LPSVAVTLAV ASLFLAMLYS TLEGSPNPAM KLGPLQYPML TESNYAAWAI KMEAYMRAQG VWDAVGAKDH PKVSARKNQM ALAAIYQAIP EGTLFLLSQK
601: KTAKSAWEAL KTMHIGDQRL RDAKLQTLKL EFEALRMKET DSIDDFAVRL TTVVNKIHTL GERIEEPYTV KKFLRAVPNK HIQIASTIEQ FGDLNTMTLQ
701: EVIGRLKVHE ERLGRLGATE KENELLTRAE WIAREEADQF SHDATKVYAS VAKILLHDAK KENELLMHAE WKAREVVDQL NHDAPKVYAS VAKILLGRSG
801: GGYGGDTYRV SASIAKILDT LLTSAARKER EVKSLIGEAH GDNEVTLRL
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.