Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- mitochondrion 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G425600.1 | Wheat | cytosol | 72.49 | 92.94 |
| HORVU4Hr1G086310.1 | Barley | cytosol | 40.04 | 85.77 |
| Os04t0266700-00 | Rice | cytosol | 14.8 | 68.42 |
| TraesCS5A01G284900.1 | Wheat | cytosol, mitochondrion, plastid | 29.41 | 53.82 |
| TraesCS5A01G359200.1 | Wheat | cytosol, peroxisome, plastid | 51.61 | 51.91 |
| TraesCS7A01G423300.1 | Wheat | cytosol | 55.22 | 49.16 |
| TraesCS1A01G421500.1 | Wheat | plastid | 57.12 | 47.85 |
| TraesCS5A01G513100.1 | Wheat | cytosol, plastid | 43.45 | 46.36 |
| Os08t0126100-00 | Rice | nucleus | 59.2 | 44.32 |
| Os08t0126000-00 | Rice | plastid | 59.2 | 41.22 |
| TraesCS2A01G358400.2 | Wheat | cytosol, nucleus, peroxisome | 49.91 | 40.28 |
| TraesCS5A01G513000.1 | Wheat | cytosol | 54.27 | 38.65 |
| TraesCS6A01G227300.1 | Wheat | mitochondrion | 43.07 | 31.93 |
| TraesCS2A01G364100.2 | Wheat | cytosol, mitochondrion | 42.13 | 31.9 |
| TraesCS5A01G512800.2 | Wheat | mitochondrion | 42.13 | 31.4 |
| TraesCS6A01G375500.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 40.23 | 28.84 |
| TraesCS1A01G146700.1 | Wheat | mitochondrion | 32.07 | 26.04 |
| TraesCS5A01G011500.1 | Wheat | cytosol | 23.53 | 24.8 |
| TraesCS5A01G011700.1 | Wheat | cytosol | 24.29 | 24.33 |
| TraesCS4A01G484700.1 | Wheat | cytosol, unclear | 23.91 | 24.05 |
| TraesCS7A01G010300.1 | Wheat | nucleus, unclear | 23.34 | 23.47 |
| TraesCS2A01G045100.1 | Wheat | peroxisome | 25.24 | 17.5 |
| TraesCS7A01G426800.1 | Wheat | cytosol, peroxisome, plasma membrane | 22.96 | 16.69 |
| TraesCS6A01G006500.1 | Wheat | cytosol, endoplasmic reticulum, peroxisome | 22.2 | 16.55 |
| TraesCS5A01G178300.1 | Wheat | mitochondrion | 16.13 | 16.13 |
| TraesCS5A01G011800.1 | Wheat | plastid | 22.2 | 13.78 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G393700.1 | EnsemblPlantsGene:TraesCS3A01G393700 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF72 | PFAM:PF13768 | PFAM:PF14624 |
| PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.1 | : |
Description
No Description!
Coordinates
chr3A:+:641629971..641631610
Molecular Weight (calculated)
56049.3 Da
IEP (calculated)
5.646
GRAVY (calculated)
-0.190
Length
527 amino acids
Sequence
(BLAST)
(BLAST)
001: MYLPDRAVYD DDEPVEPPAQ GAPLDDWDLV HDAANGGGKL VLDAHCEHPA VARGKPHENF VVLVHAKAPA AQTRAPLDLV TVLDVIGSMA GHKIALLKKA
101: MEFIVDQLGP ADRLSVVAFS TAAHRVIPLT RMSDAGKVKA KDAVQLLEAE GGTNILKGLT EAAKVLDGRR HKNAVVSVIL LSDGQDTYNL DLGGLVPSSL
201: LSGAGHRSTP IHTFGFGVDH DSSAMHTIAE ETGGTFSFIE DEKVVQDSFA QCIGGLLSVV VQEALISVKC VNPVRVRAVK SGRYDASIDA YGRSASVDVG
301: ELYADEERRF LLLVDVPRAG DADDVTRLVK VTCTYRDTAT GQVLDVAGED IAVQRPVELA KDQQPSMDVA REKFRVEATE DIAAARAAAE RGEYAEAARI
401: LERRREALAD DARCKALVEE LRELSTRVAS RREYEQSGCA CILTGYSSHA QQRAASAFVA GAEGYGCRQP GGAAPGAAPS ILGFGAAGAY ATPAMQRMVG
501: ASRQIREQQQ QQPATSKRKS GSNGGAY
101: MEFIVDQLGP ADRLSVVAFS TAAHRVIPLT RMSDAGKVKA KDAVQLLEAE GGTNILKGLT EAAKVLDGRR HKNAVVSVIL LSDGQDTYNL DLGGLVPSSL
201: LSGAGHRSTP IHTFGFGVDH DSSAMHTIAE ETGGTFSFIE DEKVVQDSFA QCIGGLLSVV VQEALISVKC VNPVRVRAVK SGRYDASIDA YGRSASVDVG
301: ELYADEERRF LLLVDVPRAG DADDVTRLVK VTCTYRDTAT GQVLDVAGED IAVQRPVELA KDQQPSMDVA REKFRVEATE DIAAARAAAE RGEYAEAARI
401: LERRREALAD DARCKALVEE LRELSTRVAS RREYEQSGCA CILTGYSSHA QQRAASAFVA GAEGYGCRQP GGAAPGAAPS ILGFGAAGAY ATPAMQRMVG
501: ASRQIREQQQ QQPATSKRKS GSNGGAY
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.