Factsheet for TraesCS5A01G284900.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, cytosol

Predictor Summary:

mitochondrion 2
plastid 1
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, mitochondrion, plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	mitochondrion
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	77.78	43.16
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	77.43	42.56
TraesCS5B01G284200.1	Wheat	cytosol	72.22	41.52
Zm00001d007190_P001	Maize	cytosol	62.5	35.93
Zm00001d008553_P001	Maize	cytosol	62.15	35.87
OQU90497	Sorghum	cytosol	63.89	35.73
OQU79988	Sorghum	cytosol	65.28	34.75
TraesCS2D01G459400.1	Wheat	mitochondrion	56.94	31.3
TraesCS5A01G513100.1	Wheat	cytosol, plastid	51.39	29.96
TraesCS3A01G393700.1	Wheat	cytosol	53.82	29.41
TraesCS7A01G423300.1	Wheat	cytosol	57.64	28.04
TraesCS2A01G358400.2	Wheat	cytosol, nucleus, peroxisome	56.6	24.96
TraesCS1A01G421500.1	Wheat	plastid	53.12	24.32
TraesCS5A01G513000.1	Wheat	cytosol	57.29	22.3
TraesCS5A01G512800.2	Wheat	mitochondrion	46.18	18.81
TraesCS2A01G364100.2	Wheat	cytosol, mitochondrion	44.1	18.25
TraesCS6A01G227300.1	Wheat	mitochondrion	44.44	18.0
Os10t0464800-00	Rice	nucleus	59.03	17.91
TraesCS6A01G375500.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	43.4	17.01
TraesCS4A01G484700.1	Wheat	cytosol, unclear	28.47	15.65
TraesCS5A01G011500.1	Wheat	cytosol	27.08	15.6
TraesCS7A01G010300.1	Wheat	nucleus, unclear	27.43	15.08
TraesCS5A01G011700.1	Wheat	cytosol	27.08	14.83
TraesCS1A01G146700.1	Wheat	mitochondrion	31.6	14.02
TraesCS7A01G426800.1	Wheat	cytosol, peroxisome, plasma membrane	30.21	12.0
TraesCS6A01G006500.1	Wheat	cytosol, endoplasmic reticulum, peroxisome	28.47	11.6
TraesCS5A01G178300.1	Wheat	mitochondrion	19.44	10.63
TraesCS2A01G045100.1	Wheat	peroxisome	27.43	10.39
TraesCS5A01G011800.1	Wheat	plastid	27.78	9.42

Protein Annotations

EnsemblPlants:TraesCS5A01G284900.1	EnsemblPlantsGene:TraesCS5A01G284900	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	PFAM:PF00092	SUPFAM:SSF53300	MapMan:35.1

Description

No Description!

Coordinates

chr5A:-:493030869..493031735

Molecular Weight (calculated)

30354.2 Da

IEP (calculated)

9.288

GRAVY (calculated)

-0.183

Length

288 amino acids

Sequence
(BLAST)

001: MGFVIDQLGP ADRLSVVSFS DGATRLTRLA RMSDAGKASA KLAVDSLVVQ AGTNIGQGLR VGAQVLVDRR HKNSVASMIL LSDGQDSYLG GKRYMDLVPP
101: SFKDAGSRPG PIHTFGFGTD HDALGMHTVA QATGGTFSFV GNQAAIQNSF AQCIGGLLSV AVQEARIAVM CLHRGVHVQE IKSGCYGNHV DADVRAASID
201: VGELYDGEER RFLVLVYVPR ARPTESVTRL VKVTCAYQDA AGRQRRRTSG GDPEAAGADR PAASVHGGGA GVCPPRRDPG HRGRTGCR

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.