Factsheet for TraesCS2D01G459400.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
mitochondrion 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5A01G359200.1	Wheat	cytosol, peroxisome, plastid	68.51	68.51
HORVU5Hr1G076190.1	Barley	cytosol, peroxisome	66.98	67.63
Zm00001d008553_P001	Maize	cytosol	58.02	60.92
Zm00001d007190_P001	Maize	cytosol	57.25	59.88
OQU90497	Sorghum	cytosol	58.59	59.61
OQU79988	Sorghum	cytosol	61.45	59.52
TraesCS5A01G284900.1	Wheat	cytosol, mitochondrion, plastid	31.3	56.94
TraesCS1D01G433500.1	Wheat	cytosol	48.85	43.46
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	46.18	42.61
TraesCS5D01G472700.1	Wheat	cytosol	47.33	41.33
TraesCS4D01G351600.1	Wheat	plastid	42.18	38.98
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	44.27	35.91
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	46.76	35.87
TraesCS4D01G339300.1	Wheat	cytosol	45.61	31.91
TraesCS6D01G207700.2	Wheat	mitochondrion	38.36	28.31
Os10t0464800-00	Rice	nucleus	50.19	27.71
TraesCS4D01G339200.1	Wheat	mitochondrion	37.21	27.58
TraesCS2D01G361900.1	Wheat	mitochondrion	36.07	27.31
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	36.07	25.61
TraesCS5D01G016400.1	Wheat	cytosol	21.56	23.35
TraesCS7D01G010200.1	Wheat	cytosol	21.56	21.56
TraesCS7D01G434400.1	Wheat	cytosol	21.37	21.5
TraesCS3D01G516600.1	Wheat	cytosol	21.18	21.26
TraesCS5D01G016600.1	Wheat	cytosol	21.18	21.22
TraesCS2D01G043700.1	Wheat	peroxisome	23.09	15.86
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	20.42	14.7
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	20.42	14.46
TraesCS5D01G016700.1	Wheat	mitochondrion	21.37	13.04
TraesCS5D01G182800.1	Wheat	cytosol, plastid	13.55	12.5

Protein Annotations

EnsemblPlants:TraesCS2D01G459400.1	EnsemblPlantsGene:TraesCS2D01G459400	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	PFAM:PF00092	PFAM:PF13768
PFAM:PF14624	SEG:seg	SUPFAM:SSF53300	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr2D:-:565939913..565942344

Molecular Weight (calculated)

55600.5 Da

IEP (calculated)

7.693

GRAVY (calculated)

-0.183

Length

524 amino acids

Sequence
(BLAST)

001: MSGRKVPRLA APPTTPQAQL AGLYQDDEPL GPLVGRIAGA IHFRQATSLT KALHLAAPPP TPYAQAQVGA YHDDEPLEHP AAAGAQAQAP ADDGGLVLKT
101: QCEFPALGRG ASRDKFAVLV HVRAPADVAR APLDLVTVLD VSGSMDGQKM ELLKQATGFV VDQLGPDDRL SMVYFSGEAT RLIPLTRMTV AGKARAKLAV
201: EGMDYMTLVL PLFTHAGTRP GPIHTFGFGA DNDALAMHTI AEATGGTFSF IENQAAIQDS FAQCIGGLLS VAVQEAPIAV TCLHRGVRVQ EIKSGSYGNH
301: VGADGRAASI DVGELYDDEE RRFLVLVHVP KARPVESVTR LVKVSCTYKV AATGQAAHAA APAAVIQRLL ELELTETHPP SIDVEQERVR LAATQDIAAA
401: RAAAEGGQHP GAARILDSRL KAVERSAPGA AGDPTCEAIK EELRDLSACV GSLREYRKTG RARLLAGMSS HAQQRASAST STSARAYLTP KMEEMVEASR
501: KQSRKRGGSQ QPWSQLKQIK HDLT

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.