Factsheet for TraesCS5D01G472700.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus, plastid
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	90.17	95.25
TraesCS5B01G338500.1	Wheat	cytosol	78.0	91.41
TraesCS1D01G433500.1	Wheat	cytosol	52.17	53.14
TraesCS4D01G351600.1	Wheat	plastid	46.33	49.03
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	51.33	47.68
TraesCS2D01G459400.1	Wheat	mitochondrion	41.33	47.33
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	53.5	47.0
TraesCS4D01G339300.1	Wheat	cytosol	53.83	43.12
TraesCS2D01G361900.1	Wheat	mitochondrion	43.17	37.43
TraesCS6D01G207700.2	Wheat	mitochondrion	44.0	37.18
TraesCS4D01G339200.1	Wheat	mitochondrion	42.67	36.21
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	39.83	32.38
TraesCS7D01G010200.1	Wheat	cytosol	23.33	26.72
TraesCS5D01G016400.1	Wheat	cytosol	21.5	26.65
TraesCS5D01G016600.1	Wheat	cytosol	22.67	26.0
TraesCS7D01G434400.1	Wheat	cytosol	21.83	25.14
TraesCS3D01G516600.1	Wheat	cytosol	20.83	23.95
TraesCS2D01G043700.1	Wheat	peroxisome	25.33	19.92
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	22.0	18.13
TraesCS5D01G182800.1	Wheat	cytosol, plastid	16.83	17.78
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	21.83	17.7
TraesCS5D01G016700.1	Wheat	mitochondrion	22.0	15.37

Protein Annotations

EnsemblPlants:TraesCS5D01G472700.1	EnsemblPlantsGene:TraesCS5D01G472700	Gene3D:3.40.50.410	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR036465
InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72
PFAM:PF00092	PFAM:PF14624	PFAM:PF17123	PFscan:PS50089	PFscan:PS50234	SEG:seg
SMART:SM00184	SMART:SM00327	SUPFAM:SSF53300	SUPFAM:SSF57850	MapMan:35.1	:

Description

No Description!

Coordinates

chr5D:-:513314831..513316633

Molecular Weight (calculated)

64180.4 Da

IEP (calculated)

7.670

GRAVY (calculated)

-0.244

Length

600 amino acids

Sequence
(BLAST)

001: MINPMETRCA VCHGDMGRGH ATFTAECSHS FHLRCVHHQI ACPLCFTPWR DVPGVAPARD LLFRDDEPLE PQPAAAATET TTAGGGVMSI TTHCEYPAIA
101: KDASRDGFAV LVHAKAPALA PAAAKAARAP LDLVMVLDVS GSMGGRKLAL LKQAVGFVVD KLGPHDRLSL VSFSCDARRL TRLTRMSDAG RASTERTVES
201: LAAGGGTNIK EGLREAAKVI DGRRYRNAVT GVILLSDGQD NYTLSSRFYN QDVATDYSVL VPPSLIRTGD GSSPPIHTFG FGTDHDSAAM HTIAEATGGT
301: FAFIENEAVI QDSFAQCIGG LLSVAAQEAR VAVECVCPGV RLRSIKSGRY KSRVDADGGA AAVEVGELYA DEERRFLLLV DVPTAGATDD VTSLMKVSCT
401: YRDVATGQSV DVAGEDVAVK RPVEAPEAEP DVEVERERLR VQAAEDIAAA RAAAERGEHA EASEMLSRRR MALRRSPLGA SGDAGCAELA AELGKLSERV
501: GDRREYDLSG RASLLCGMSA HSQQRTSVKV GRARYATPAM RKMVALSVKT REQQQQQQQA QAQPSPPSRT TMPPPPPPST ATPALAKNLV RRYHRFLRLK

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.