Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G577600.1 | Wheat | cytosol | 97.13 | 96.76 |
| TraesCS7D01G434400.1 | Wheat | cytosol | 82.57 | 82.73 |
| TraesCS7D01G010200.1 | Wheat | cytosol | 62.84 | 62.6 |
| TraesCS5D01G016400.1 | Wheat | cytosol | 50.57 | 54.55 |
| TraesCS5D01G016600.1 | Wheat | cytosol | 53.45 | 53.35 |
| Zm00001d024886_P002 | Maize | cytosol | 43.3 | 43.8 |
| Zm00001d024014_P001 | Maize | cytosol | 41.19 | 42.74 |
| KXG20893 | Sorghum | cytosol, plastid | 40.61 | 34.7 |
| TraesCS7D01G418800.1 | Wheat | cytosol, peroxisome, plasma membrane | 37.55 | 26.92 |
| TraesCS6D01G009300.1 | Wheat | cytosol, endoplasmic reticulum, plasma membrane | 34.87 | 24.59 |
| TraesCS5D01G348200.1 | Wheat | cytosol, mitochondrion, nucleus, plastid | 23.37 | 21.48 |
| TraesCS2D01G459400.1 | Wheat | mitochondrion | 21.26 | 21.18 |
| TraesCS1D01G433500.1 | Wheat | cytosol | 23.75 | 21.05 |
| TraesCS5D01G472700.1 | Wheat | cytosol | 23.95 | 20.83 |
| TraesCS6D01G207700.2 | Wheat | mitochondrion | 27.78 | 20.42 |
| TraesCS2D01G361900.1 | Wheat | mitochondrion | 26.25 | 19.8 |
| TraesCS4D01G351600.1 | Wheat | plastid | 21.46 | 19.75 |
| TraesCS1D01G144900.1 | Wheat | cytosol, mitochondrion, nucleus, peroxisome, plastid | 25.67 | 19.62 |
| TraesCS2D01G357400.1 | Wheat | cytosol, nucleus, peroxisome | 23.95 | 19.35 |
| TraesCS4D01G339300.1 | Wheat | cytosol | 27.2 | 18.96 |
| TraesCS4D01G339200.1 | Wheat | mitochondrion | 25.29 | 18.67 |
| TraesCS6D01G360000.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole | 25.67 | 18.16 |
| TraesCS5D01G016700.1 | Wheat | mitochondrion | 22.61 | 13.74 |
| TraesCS2D01G043700.1 | Wheat | peroxisome | 19.73 | 13.5 |
| TraesCS5D01G182800.1 | Wheat | cytosol, plastid | 12.64 | 11.62 |
Protein Annotations
| EnsemblPlants:TraesCS3D01G516600.1 | EnsemblPlantsGene:TraesCS3D01G516600 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | ncoils:Coil | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | PFAM:PF00092 |
| PFAM:PF14624 | PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3D:-:600187143..600188896
Molecular Weight (calculated)
56251.1 Da
IEP (calculated)
5.804
GRAVY (calculated)
-0.212
Length
522 amino acids
Sequence
(BLAST)
(BLAST)
001: MVFNDDENPA STLNTGSTKG LVKIQKPAYS RDDVALTADE VTAVIELNAA PSAVVREGLD LVVVLDVSGS MQGERLESMK QSMQFVIMKL TPVDRLSIVT
101: FSSHAQRLCP LRSMTEAAQK EVKAIIDGLK AKGTTNIKSG LEIARQVVAE RSTKKSRTAN VFLMSDGVQS AGEATDVDLG SASVYTFGLG KDTDHKLLNA
201: IAKKSPGGTF STVRDGANLT RPFSQMLGGL LTVVAQDVKL TLTPKTEDGL KVMVVPADTD YTQTTDSATG VITINFGTLF SGESRKVTVK MTLSDCAAGT
301: TRHDAVLAEA QHSYTAQSVV HGLQTPENLK IYRTPNPATV AGSKARWVLA ELARRRQAQA IRDAMALAEA GDLDGARYRL VEAQNALEEL VLDDGQKLLD
401: SLRAELVQLI KLMATKDLYE AQGRPYALAS DTSHARQRYA DRGDDTDAVR LFATARMDTY LKQAKQFDSD PTKPLPSAAD DVKEEIAANP MAAFSSELAV
501: YLQKAIEALQ AIEKMINPTT TT
101: FSSHAQRLCP LRSMTEAAQK EVKAIIDGLK AKGTTNIKSG LEIARQVVAE RSTKKSRTAN VFLMSDGVQS AGEATDVDLG SASVYTFGLG KDTDHKLLNA
201: IAKKSPGGTF STVRDGANLT RPFSQMLGGL LTVVAQDVKL TLTPKTEDGL KVMVVPADTD YTQTTDSATG VITINFGTLF SGESRKVTVK MTLSDCAAGT
301: TRHDAVLAEA QHSYTAQSVV HGLQTPENLK IYRTPNPATV AGSKARWVLA ELARRRQAQA IRDAMALAEA GDLDGARYRL VEAQNALEEL VLDDGQKLLD
401: SLRAELVQLI KLMATKDLYE AQGRPYALAS DTSHARQRYA DRGDDTDAVR LFATARMDTY LKQAKQFDSD PTKPLPSAAD DVKEEIAANP MAAFSSELAV
501: YLQKAIEALQ AIEKMINPTT TT
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.