Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G516600.1 | Wheat | cytosol | 96.76 | 97.13 |
| TraesCS7B01G344600.1 | Wheat | mitochondrion | 53.24 | 79.49 |
| TraesCS5B01G009400.1 | Wheat | cytosol | 49.62 | 54.39 |
| TraesCS5B01G009600.1 | Wheat | cytosol | 54.01 | 53.9 |
| KXG20893 | Sorghum | cytosol, plastid | 40.27 | 34.53 |
| TraesCS2B01G026900.1 | Wheat | cytosol | 33.97 | 29.72 |
| TraesCS7B01G327100.1 | Wheat | cytosol, peroxisome, plasma membrane | 35.88 | 25.82 |
| TraesCS5B01G284200.1 | Wheat | cytosol | 23.66 | 24.75 |
| TraesCS2B01G515000.1 | Wheat | cytosol | 24.81 | 24.62 |
| TraesCS3B01G425600.1 | Wheat | cytosol | 17.94 | 22.87 |
| TraesCS5B01G338500.1 | Wheat | cytosol | 20.99 | 21.48 |
| TraesCS6B01G057500.1 | Wheat | cytosol | 20.23 | 21.03 |
| TraesCS1B01G164800.1 | Wheat | cytosol, nucleus, peroxisome | 25.38 | 20.91 |
| TraesCS1B01G456800.1 | Wheat | cytosol | 23.86 | 20.73 |
| TraesCS6B01G254400.1 | Wheat | mitochondrion | 27.67 | 20.42 |
| TraesCS2B01G382300.1 | Wheat | mitochondrion | 26.34 | 19.86 |
| TraesCS2B01G377900.1 | Wheat | cytosol | 24.43 | 19.81 |
| TraesCS4B01G344200.1 | Wheat | cytosol | 26.72 | 19.42 |
| TraesCS4B01G344100.1 | Wheat | mitochondrion | 25.95 | 19.24 |
| TraesCS4B01G358100.1 | Wheat | plastid | 25.57 | 18.82 |
| TraesCS6B01G413100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 25.95 | 18.4 |
| TraesCS5B01G009700.1 | Wheat | mitochondrion | 22.52 | 13.74 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 19.47 | 13.25 |
| TraesCS5B01G176000.2 | Wheat | mitochondrion | 12.4 | 12.33 |
Protein Annotations
| EnsemblPlants:TraesCS3B01G577600.1 | EnsemblPlantsGene:TraesCS3B01G577600 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | ncoils:Coil | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | PFAM:PF00092 |
| PFAM:PF14624 | PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.2 |
Description
No Description!
Coordinates
chr3B:-:807372643..807374424
Molecular Weight (calculated)
56371.1 Da
IEP (calculated)
5.418
GRAVY (calculated)
-0.215
Length
524 amino acids
Sequence
(BLAST)
(BLAST)
001: MVVFNDDENP ASTLNKGSTK GLVKIQKPAY SRDDVALTAD EVTAVIELNA APSAVVREGL DLVVVLDVSG SMQGERLESM KQSMQFVIMK LTPVDRLSVV
101: TFSSHAQRLC PLRSMTESAQ KEVKAIIDGL KASGTTNIKS GLEIARQVVA ERSTKKSRTA NVFLMSDGVQ SAGEATDVDL GSASVYTFGL GKDTDHKLLN
201: AIAKKSPGGT FSTVRDGANL TRPFSQMLGG LLTVVAQDVK LTLTPKTEED GLKAMVVPAD TDYTQTTDSA TGVITINFGT LFSGESRKVT VTMTLSDCAA
301: GTTRHDAVLA EAQHSYTAQS VVHGLQTPEN LKIYRTQNPA TVAGSKARWV LAELARRRQA QAIRDAMALA EAGDLDGARY KLVEAQNALE DLVLDDGQKL
401: IDSLRAELAQ LIKLMATKEL YEAQGRPYAL ASDTSHARQR YADRGDETDA VRLFATARMD TYLKQAKQFD SDPTKPLPSA ADDVKEEIAA NPMAAFSSEL
501: AVYLQKAIEA LQAIEKMINP TTTA
101: TFSSHAQRLC PLRSMTESAQ KEVKAIIDGL KASGTTNIKS GLEIARQVVA ERSTKKSRTA NVFLMSDGVQ SAGEATDVDL GSASVYTFGL GKDTDHKLLN
201: AIAKKSPGGT FSTVRDGANL TRPFSQMLGG LLTVVAQDVK LTLTPKTEED GLKAMVVPAD TDYTQTTDSA TGVITINFGT LFSGESRKVT VTMTLSDCAA
301: GTTRHDAVLA EAQHSYTAQS VVHGLQTPEN LKIYRTQNPA TVAGSKARWV LAELARRRQA QAIRDAMALA EAGDLDGARY KLVEAQNALE DLVLDDGQKL
401: IDSLRAELAQ LIKLMATKEL YEAQGRPYAL ASDTSHARQR YADRGDETDA VRLFATARMD TYLKQAKQFD SDPTKPLPSA ADDVKEEIAA NPMAAFSSEL
501: AVYLQKAIEA LQAIEKMINP TTTA
001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S
Arabidopsis Description
T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]
SUBAcon: [plastid]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.