Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d024014_P001 | Maize | cytosol | 40.4 | 48.11 |
| Zm00001d024886_P002 | Maize | cytosol | 40.57 | 47.09 |
| EES05180 | Sorghum | mitochondrion | 28.38 | 46.07 |
| EES11757 | Sorghum | cytosol | 39.9 | 46.05 |
| KXG38506 | Sorghum | cytosol | 25.04 | 44.38 |
| TraesCS3B01G577600.1 | Wheat | cytosol | 29.72 | 33.97 |
| TraesCS7B01G344600.1 | Wheat | mitochondrion | 19.03 | 32.48 |
| TraesCS5B01G009400.1 | Wheat | cytosol | 25.71 | 32.22 |
| TraesCS5B01G009600.1 | Wheat | cytosol | 28.21 | 32.19 |
| TraesCS6B01G057500.1 | Wheat | cytosol | 20.37 | 24.21 |
| TraesCS7B01G327100.1 | Wheat | cytosol, peroxisome, plasma membrane | 28.71 | 23.63 |
| TraesCS5B01G284200.1 | Wheat | cytosol | 19.03 | 22.75 |
| TraesCS2B01G515000.1 | Wheat | cytosol | 19.7 | 22.35 |
| TraesCS3B01G425600.1 | Wheat | cytosol | 14.19 | 20.68 |
| TraesCS1B01G164800.1 | Wheat | cytosol, nucleus, peroxisome | 20.2 | 19.03 |
| TraesCS5B01G338500.1 | Wheat | cytosol | 16.03 | 18.75 |
| TraesCS1B01G456800.1 | Wheat | cytosol | 18.86 | 18.74 |
| TraesCS2B01G382300.1 | Wheat | mitochondrion | 21.54 | 18.56 |
| TraesCS4B01G344100.1 | Wheat | mitochondrion | 21.04 | 17.82 |
| TraesCS2B01G377900.1 | Wheat | cytosol | 18.7 | 17.34 |
| TraesCS6B01G254400.1 | Wheat | mitochondrion | 20.53 | 17.32 |
| TraesCS4B01G344200.1 | Wheat | cytosol | 20.7 | 17.2 |
| TraesCS4B01G358100.1 | Wheat | plastid | 19.37 | 16.29 |
| TraesCS6B01G413100.1 | Wheat | cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole | 19.2 | 15.56 |
| TraesCS5B01G009700.1 | Wheat | mitochondrion | 19.87 | 13.85 |
| TraesCS5B01G176000.2 | Wheat | mitochondrion | 11.19 | 12.71 |
| TraesCS2B01G057300.1 | Wheat | peroxisome | 15.53 | 12.08 |
Protein Annotations
| EnsemblPlants:TraesCS2B01G026900.1 | EnsemblPlantsGene:TraesCS2B01G026900 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF64 | PFAM:PF00092 | PFAM:PF14624 |
| PFscan:PS50234 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | MapMan:35.2 | : |
Description
No Description!
Coordinates
chr2B:+:12850472..12852409
Molecular Weight (calculated)
66865.7 Da
IEP (calculated)
4.899
GRAVY (calculated)
-0.346
Length
599 amino acids
Sequence
(BLAST)
(BLAST)
001: MLELTGTAFS GDRPGLDLVV VVDVSGSMHG KKMNQLKTAM RFLVSKLSLM DQLSIVTFSN AATKLCPLQQ ITKASQRELQ MLINSLKPCG DYTKIMDGLR
101: SGLKILADRK VSGGRVAAVM LMCDGTRDDA QGAMQVGVSN NLPIYTFGFG MHSDPRVLST IAANSMGGTF SHVPDIGGSG LTKAFSQCLA GLLTVAVQDL
201: ELTVAPAGDE STIVKVTCGN YPQTRNGDSL TVSFGHLYSR EVRNVIVDLR FATVDSERST EMLRVTYSYN SSSSRRQQLF APHEMLTVWR TSVEVLHTSY
301: TTAELQREEA RLRTRRMINE AITMADGEDV LAAQCKLVEA QSMLDEQSNP LLRAELQKLL EHFQTSDEYL WRGSMYAFSS CSSHDRQRFT ARGHDAETMR
401: LFATQRMDEY LEQAKKFHMD PTKPLPSVDD DVEEEVAALL INVASREEEM RRLGLDTEES VRLFATPRMD TYLEQARVFN EEPTMPLPSV NEDGNKLLVA
501: QNSLECVMEQ SNLLLRTELQ EPPKPEEANK EQGRAYALAS ETLHGRQRFP SRGGREESLR LFSTPRMDAY LELARVFDKD DEDVKEEVVS LIDVVASEE
101: SGLKILADRK VSGGRVAAVM LMCDGTRDDA QGAMQVGVSN NLPIYTFGFG MHSDPRVLST IAANSMGGTF SHVPDIGGSG LTKAFSQCLA GLLTVAVQDL
201: ELTVAPAGDE STIVKVTCGN YPQTRNGDSL TVSFGHLYSR EVRNVIVDLR FATVDSERST EMLRVTYSYN SSSSRRQQLF APHEMLTVWR TSVEVLHTSY
301: TTAELQREEA RLRTRRMINE AITMADGEDV LAAQCKLVEA QSMLDEQSNP LLRAELQKLL EHFQTSDEYL WRGSMYAFSS CSSHDRQRFT ARGHDAETMR
401: LFATQRMDEY LEQAKKFHMD PTKPLPSVDD DVEEEVAALL INVASREEEM RRLGLDTEES VRLFATPRMD TYLEQARVFN EEPTMPLPSV NEDGNKLLVA
501: QNSLECVMEQ SNLLLRTELQ EPPKPEEANK EQGRAYALAS ETLHGRQRFP SRGGREESLR LFSTPRMDAY LELARVFDKD DEDVKEEVVS LIDVVASEE
001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR
Arabidopsis Description
Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]
SUBAcon: [mitochondrion,plastid,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.