Factsheet for TraesCS3B01G425600.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G393700.1	Wheat	cytosol	92.94	72.49
HORVU4Hr1G086310.1	Barley	cytosol	42.58	71.14
Os04t0266700-00	Rice	cytosol	18.73	67.54
TraesCS4B01G358100.1	Wheat	plastid	87.83	50.7
TraesCS5B01G284200.1	Wheat	cytosol	47.45	38.92
TraesCS1B01G456800.1	Wheat	cytosol	54.5	37.15
TraesCS2B01G515000.1	Wheat	cytosol	46.47	36.17
TraesCS5B01G338500.1	Wheat	cytosol	43.55	34.96
Os08t0126100-00	Rice	nucleus	59.85	34.94
TraesCS1B01G164800.1	Wheat	cytosol, nucleus, peroxisome	53.53	34.59
Os08t0126000-00	Rice	plastid	59.61	32.36
TraesCS2B01G377900.1	Wheat	cytosol	49.15	31.27
TraesCS4B01G344200.1	Wheat	cytosol	53.53	30.51
TraesCS6B01G254400.1	Wheat	mitochondrion	44.04	25.49
TraesCS2B01G382300.1	Wheat	mitochondrion	42.58	25.18
TraesCS4B01G344100.1	Wheat	mitochondrion	42.58	24.75
TraesCS6B01G413100.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, vacuole	38.2	21.24
TraesCS5B01G009400.1	Wheat	cytosol	21.65	18.62
TraesCS7B01G344600.1	Wheat	mitochondrion	15.33	17.95
TraesCS3B01G577600.1	Wheat	cytosol	22.87	17.94
TraesCS5B01G009600.1	Wheat	cytosol	21.9	17.14
TraesCS2B01G026900.1	Wheat	cytosol	20.68	14.19
TraesCS7B01G327100.1	Wheat	cytosol, peroxisome, plasma membrane	21.41	12.09
TraesCS5B01G009700.1	Wheat	mitochondrion	23.11	11.06
TraesCS5B01G176000.2	Wheat	mitochondrion	13.63	10.63
TraesCS2B01G057300.1	Wheat	peroxisome	19.46	10.39
TraesCS6B01G057500.1	Wheat	cytosol	11.92	9.72

Protein Annotations

EnsemblPlants:TraesCS3B01G425600.1	EnsemblPlantsGene:TraesCS3B01G425600	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72	PFAM:PF13768	PFAM:PF14624
SEG:seg	SUPFAM:SSF53300	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3B:+:663421687..663422922

Molecular Weight (calculated)

43900.6 Da

IEP (calculated)

6.022

GRAVY (calculated)

-0.290

Length

411 amino acids

Sequence
(BLAST)

001: MWDVGKVKAK DAVQLLEAEG GTNILKGLTE AAKVLDGRRH KNAVVSVILL SDGQDTYNLD LGGYGYSSYQ TNYRGLVPSS LLSGAGHRST PIHTFGFGVD
101: HDSSAMHTIA EETGGTFSFI EDEKVVQDSF AQCIGGLLSV VVQEALITVK CVDPVRVRAV KSGRYNTSID AYGRSASVDV GELYADEERR FLLLVDVPRA
201: GDADDVTQLV KVTCTYRDTA TGQVLDVAGE NVAVQRPVEL AKDQQPSMDV AREKFRVEAT EDIAAARAAA ERGEYTEAAR ILERRREALL PALADDARCK
301: ALVEELRELS TRVASRREYE KSGRACILTG YSSHAQQRAA SAFVAGAEGY GCPQPGGAAP GAAPSILGFG AAGAYATPAM QRMVGASRQI REQQQQPATS
401: KRKSGSNGGA Y

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.