Factsheet for TraesCS4D01G351600.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 1
mitochondrion 1
plastid 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, mitochondrion, plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
TargetP:	plastid
WoLF PSORT:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4B01G358100.1	Wheat	plastid	96.83	77.11
HORVU4Hr1G086310.1	Barley	cytosol	33.33	76.83
Os04t0266700-00	Rice	cytosol	13.76	68.42
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	48.68	48.59
Os08t0126100-00	Rice	nucleus	57.67	46.45
TraesCS5D01G472700.1	Wheat	cytosol	49.03	46.33
TraesCS1D01G433500.1	Wheat	cytosol	46.56	44.82
TraesCS2D01G459400.1	Wheat	mitochondrion	38.98	42.18
Os08t0126000-00	Rice	plastid	55.38	41.48
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	49.38	41.0
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	43.39	38.08
TraesCS4D01G339300.1	Wheat	cytosol	47.09	35.65
TraesCS2D01G361900.1	Wheat	mitochondrion	37.92	31.07
TraesCS6D01G207700.2	Wheat	mitochondrion	38.62	30.85
TraesCS4D01G339200.1	Wheat	mitochondrion	36.16	29.0
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	34.74	26.69
TraesCS7D01G434400.1	Wheat	cytosol	21.34	23.22
TraesCS5D01G016400.1	Wheat	cytosol	19.75	23.14
TraesCS5D01G016600.1	Wheat	cytosol	20.28	21.99
TraesCS3D01G516600.1	Wheat	cytosol	19.75	21.46
TraesCS7D01G010200.1	Wheat	cytosol	19.75	21.37
TraesCS2D01G043700.1	Wheat	peroxisome	20.63	15.33
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	19.22	14.97
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	18.52	14.19
TraesCS5D01G016700.1	Wheat	mitochondrion	19.58	12.92
TraesCS5D01G182800.1	Wheat	cytosol, plastid	12.7	12.68

Protein Annotations

EnsemblPlants:TraesCS4D01G351600.1	EnsemblPlantsGene:TraesCS4D01G351600	Gene3D:3.40.50.410	InterPro:IPR001841	InterPro:IPR002035	InterPro:IPR036465
InterPro:VWF_A	InterPro:Vwaint_dom	InterPro:Znf_RING	InterPro:vWFA_dom_sf	PANTHER:PTHR10579	PANTHER:PTHR10579:SF72
PFAM:PF00092	PFAM:PF14624	PFscan:PS50089	SEG:seg	SUPFAM:SSF53300	SUPFAM:SSF57850
TIGR:cd16448	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr4D:+:503409678..503411796

Molecular Weight (calculated)

59299.8 Da

IEP (calculated)

5.364

GRAVY (calculated)

-0.188

Length

567 amino acids

Sequence
(BLAST)

001: MASAGQRCAG CYGGIGRSEA AFSSECAHTF HPLCVSGAHS CPSCSAPMPM WTSPFVDQPS PAVYDDDEPL EPLAAPLDDD AANGGGRLVL DAHCEHPAVA
101: RGEPHDSFVV LVHAKAPGAA TAAAAEQART PLDLVTVLDV SGSMTDLKIA LAGKVKAKDA VQLLMADGGT NILKGLTEAA KVLDGRRHKN AVASVILLSD
201: GQDTYNLGGG GYGYGSVSYS KNYRALVPGS LLSSAGHRST PIHTFGFGGD HDSSAMHTIA EETGGTFSFI EDETVVQDSF AQCIGGLLSV VVQEALITVK
301: CVHPVRVRAV KSGRYDSSID AYARSASVDV GELYADEERR FLLLVDVPKA GEADEVTQIM KVTCTYRDTA TGQVVDVAGE DVAVQRPVEV AKDQQPSMEV
401: AREKFRVEAT EDIAAARAAA ERGEYTEAAR ILDRRQEALL PALADDARCK ALVEELRELS TRVASRREYE KSGRACILTG YSSHAQQRAA SACVAGAGGG
501: YRCPPPPGGA GGMGMGGAAS VFGFGAAGAY ATPAMQMMVG ASRQVREQQQ QQQPSTLKRK SGSDGGN

Best Arabidopsis Sequence Match ( AT1G08050.1 )
(BLAST)

001: MENPNNLRES KSHLNLNECL TLPKTLDPSS PSPSDASRSS VDPNRPDSSS SRPGSTPSSS GLRFSKGRCA ICLYEIRKED GKAIFTAECS HSFHFDCITS
101: NVKHGNRICP LCRTQWKQVP LCDVDSVPTF VAQRGFEDDE PLPQGDTQIH SDGHRSDHQA LEIKLFPEVS ALAKPVSRAD FAVLVHLKAE GVSDDARRAR
201: APLDLITVLD VSGSMDGVKM ELMKNAMSFV IQNLGETDRL SVISFSSMAR RLFPLRLMSE TGKQAAMQAV NSLVADGGTN IAEGLKIGAR VIEGRRWKNP
301: VSGMMLLSDG QDNFTFSHAG VRLRTDYESL LPSSCRIPIH TFGFGSDHDA ELMHTISEVS SGTFSFIETE TVIQDAFAQC IGGLLSVVIL EQVVEIECIH
401: EQGLKISSIK AGSYRSRIAP DARTATIDVG DMYAEEERDF LVLLEIPCCD NGSGESESLS LLKVRCVYKD PVTKEIVHVE SGELSIQRPM KLTGKEVVSI
501: EVDRQLNRFL VSQAMSEARV LADGGDLSGA VGILRNRERE LSETPSAQSS DRLCQSLSSE LSALQERMTS RRMYRTSGRA YAFSSMSSHS AQRATARGDS
601: TQGFSPVQAY QTSPMARMVT RSQLLVLESP TKPSPGRGEQ S

Arabidopsis Description

T6D22.13 [Source:UniProtKB/TrEMBL;Acc:Q9LN03]
SUBAcon: [plastid]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.