Factsheet for TraesCS7D01G010200.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G484700.1	Wheat	cytosol, unclear	96.76	96.76
HORVU7Hr1G001030.5	Barley	cytosol	84.54	84.38
TraesCS7D01G434400.1	Wheat	cytosol	62.6	62.96
TraesCS3D01G516600.1	Wheat	cytosol	62.6	62.84
TraesCS5D01G016600.1	Wheat	cytosol	59.73	59.85
TraesCS5D01G016400.1	Wheat	cytosol	54.77	59.3
Zm00001d024886_P002	Maize	cytosol	46.76	47.48
Zm00001d024014_P001	Maize	cytosol	45.23	47.12
KXG20893	Sorghum	cytosol, plastid	46.95	40.26
TraesCS7D01G418800.1	Wheat	cytosol, peroxisome, plasma membrane	37.6	27.06
TraesCS6D01G009300.1	Wheat	cytosol, endoplasmic reticulum, plasma membrane	36.07	25.54
TraesCS1D01G433500.1	Wheat	cytosol	26.91	23.94
TraesCS5D01G348200.1	Wheat	cytosol, mitochondrion, nucleus, plastid	25.76	23.77
TraesCS5D01G472700.1	Wheat	cytosol	26.72	23.33
TraesCS2D01G459400.1	Wheat	mitochondrion	21.56	21.56
TraesCS2D01G357400.1	Wheat	cytosol, nucleus, peroxisome	26.14	21.21
TraesCS1D01G144900.1	Wheat	cytosol, mitochondrion, nucleus, peroxisome, plastid	26.14	20.06
TraesCS6D01G207700.2	Wheat	mitochondrion	27.1	20.0
TraesCS2D01G361900.1	Wheat	mitochondrion	26.14	19.8
TraesCS4D01G351600.1	Wheat	plastid	21.37	19.75
TraesCS4D01G339300.1	Wheat	cytosol	27.86	19.49
TraesCS4D01G339200.1	Wheat	mitochondrion	25.95	19.24
TraesCS6D01G360000.1	Wheat	cytosol, endoplasmic reticulum, extracellular, golgi, mitochondrion, nucleus, plasma membrane, plastid, vacuole	25.0	17.75
TraesCS5D01G016700.1	Wheat	mitochondrion	23.28	14.2
TraesCS2D01G043700.1	Wheat	peroxisome	20.61	14.15
TraesCS5D01G182800.1	Wheat	cytosol, plastid	12.79	11.8

Protein Annotations

EnsemblPlants:TraesCS7D01G010200.1	EnsemblPlantsGene:TraesCS7D01G010200	Gene3D:3.40.50.410	InterPro:IPR002035	InterPro:IPR036465	InterPro:VWF_A
InterPro:Vwaint_dom	InterPro:vWFA_dom_sf	ncoils:Coil	PANTHER:PTHR10579	PANTHER:PTHR10579:SF64	PFAM:PF00092
PFAM:PF14624	PFscan:PS50234	SEG:seg	SMART:SM00327	SUPFAM:SSF53300	MapMan:35.2

Description

No Description!

Coordinates

chr7D:+:4877186..4878964

Molecular Weight (calculated)

55527.7 Da

IEP (calculated)

4.500

GRAVY (calculated)

-0.235

Length

524 amino acids

Sequence
(BLAST)

001: MAFNDDEKPP ASNAGNTKGL VTITEPKFSK DEAALSADEV TAVVELKATS STAVREGLDL VAVLDVSGSM QGDKLQSMKM AMQFVIMKLT PVDRLSVVSF
101: SGSATRHCPL RSVTQQAQAD LKAIVDGLVA NGGTNIKAGL DTALAIVAGR ATTKARTPNV FLMSDGQQSD GDARQVDPGN VAVYTFGFGK DADHALLSDV
201: ARKSPGGTFN SVPDGGNVTA PFSQLLGGLL TIVAQDVQLT LTPKAEDPSA PDLDTMTVAP GTDYTQTTDG GTGVITIKFG TLFSGETRKV AINFKLLEST
301: LTTPYDGLVA EAQHSYNVQG SPQGQTPQDV VIPRSPDAPG EEAVSVKARG VLAEMARRQH AGAIGEARQM ADGKNLEEAR YKLADAQNAL EDIVLNDGEK
401: LVGMLRAELQ QLLDLMETQE LYEAEGRPYA LASETSHGRQ RYAARGGDMD AVRLFATPRM DTYLEQAKKF EEDPTAPLPS ADEDAKEEMA ANPLAAISAP
501: IAFYIKVAIQ ALQEIEKLVA PPTK

Best Arabidopsis Sequence Match ( AT5G60710.1 )
(BLAST)

001: MGSKWRKAKV ALGLNLCLYV PKTLEDSSPP RRSDDAVSLS PVIVQRPSTP TPSSSGLRLP RSMSKSSSKK TCAICLTAMK AGQGHAIFTA ECSHSFHFQC
101: ITTNVKHGNQ ICPVCRAKWN EIPIQSPNAK PKSGVKPIGR PRDDAWMSIP PRRSSPIQYT SRPDCLRVSS IFNTEPAVFN DDEALEHQDR SAESGLDKPG
201: VTGTLEVKTY PEISEVVRSV SFKDFAVLIN LKAPTSSKSS SNPSSSSRAP VDLVTVLDVS GSMAGTKLAL LKRAMGFVIQ NLGPFDRLSV ISFSSTARRN
301: FPLRLMTETG KQEALQAVNS LVSNGGTNIA EGLKKGARVL IDRRFKNPVS SIVLLSDGQD TYTMTSPNGS RGTDYKALLP KEINGNRIPV HAFGFGADHD
401: ASLMHSIAEN SGGTFSFIES ETVIQDAFAQ CIGGLLSVVV QELCVTIECM HHLLRIGSVK AGSYRFDNGP NSRTGSIAVG DLYAEEERNF LVNLDIPIVD
501: GVSDVMSLLK VQCVYKDPVT KETVNLNNSG EVKILRPIVM TERRPVVSVE VDRQRIRLRA AEAISEARVL AERGDLTEAV SVLETCRGLL TESVSGRAGD
601: QLCVTLCAEL KEMQERMASR QVYEASGRAY VLAGLSSHSW QRATARGDMS DSTTTSYQTQ SMVDMVNLSQ TMTFGMPIAS SNSSPSGQRK LRQALSFPAK
701: PRPR

Arabidopsis Description

Retroelement pol polyprotein-like [Source:UniProtKB/TrEMBL;Acc:Q9FF49]
SUBAcon: [mitochondrion,plastid,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.