Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 4
- cytosol 1
- vacuole 1
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os11t0687100-01 | Rice | nucleus | 78.53 | 82.62 |
| EER87790 | Sorghum | endoplasmic reticulum, extracellular | 53.3 | 55.82 |
| Zm00001d045454_P001 | Maize | plasma membrane | 53.15 | 54.46 |
| Zm00001d036069_P001 | Maize | endoplasmic reticulum, extracellular, vacuole | 51.05 | 53.88 |
| Os11t0687200-02 | Rice | golgi | 35.89 | 39.97 |
| Os06t0578700-01 | Rice | golgi | 34.68 | 39.69 |
| Os04t0266700-00 | Rice | cytosol | 6.01 | 35.09 |
| Os11t0679000-00 | Rice | cytosol | 29.73 | 34.14 |
| Os11t0650600-00 | Rice | cytosol | 24.32 | 28.47 |
| Os11t0650500-00 | Rice | cytosol | 20.42 | 23.01 |
| Os12t0431700-00 | Rice | cytosol | 6.76 | 21.74 |
| Os03t0403600-01 | Rice | cytosol, extracellular | 13.51 | 21.63 |
| Os03t0142500-01 | Rice | plasma membrane | 22.07 | 21.18 |
| Os08t0126100-00 | Rice | nucleus | 21.92 | 20.74 |
| Os02t0619600-01 | Rice | mitochondrion | 21.77 | 20.45 |
| Os12t0203500-00 | Rice | vacuole | 16.82 | 20.44 |
| Os04t0508800-01 | Rice | plasma membrane | 21.32 | 20.06 |
| Os02t0806700-01 | Rice | nucleus | 20.72 | 19.09 |
| Os08t0126000-00 | Rice | plastid | 20.72 | 18.23 |
| Os01t0640200-00 | Rice | cytosol | 16.37 | 17.41 |
| Os10t0464500-00 | Rice | extracellular, plasma membrane | 10.81 | 14.81 |
| Os10t0464800-00 | Rice | nucleus | 20.12 | 14.12 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 14.41 | 13.93 |
| Os09t0298500-01 | Rice | nucleus | 10.96 | 13.72 |
| GSMUA_Achr4P06340_001 | Banana | mitochondrion | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:Os06t0578100-00 | EnsemblPlantsGene:Os06g0578100 | Gene3D:3.40.50.410 | InterPro:IPR002035 | InterPro:IPR036465 | InterPro:VWF_A |
| InterPro:Vwaint_dom | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF57 | PFAM:PF13768 | PFAM:PF14624 |
| PFscan:PS50234 | ProteinID:BAS98358.1 | SEG:seg | SMART:SM00327 | SUPFAM:SSF53300 | UniParc:UPI0003939C84 |
| UniProt:A0A0P0WY66 | MapMan:35.2 | : | : | : | : |
Description
Similar to Retrotransposon protein. (Os06t0578100-00)
Coordinates
chr6:-:22488680..22491650
Molecular Weight (calculated)
72842.4 Da
IEP (calculated)
7.052
GRAVY (calculated)
-0.114
Length
666 amino acids
Sequence
(BLAST)
(BLAST)
001: MQAMSVAPVK VSTTPIFPTI PRAQTNKDFQ VLLRVEAPPA ADLNGHVPID VVAVLDVSGS MNDPVAASPE SNLQATRLDV LKASMKFIIR KLDDGDRLSI
101: VAFNDGPVKE YSSGLLDVSG DGRSIAGKKI DRLQARGGSG SALMPELQEA VKILDERQGN SRNRVGFILL LTDGDDTTGF RWSRDVIHGA VGKYPVHTFA
201: LGAAHDPEAL LHIAQESRGT YSFVDDGNLD KIAGALAVCL GGLKTVAAVD TRVSLKTAEL GGARIVRVDS GGYESSVACG GASGEVVVGV LYAGEVKSFV
301: VHLHVPAASS TTTFSSVECG YCDAAATVCD HHHHHHCHHR HHQQQLLAIG YSYSHAPGGE AVSIEGHGVF VERPEVAVFS VDGGRQRQTL LPSPVVMQHM
401: VRFELLELVA GFAETEMLSK KGTMQLRGGG ARAGDVLQGK WEEFRRARQF WGGVELDGLE EDVDAMVASL RSGLAYVSSW VSSHQMQRAT AMGSPEKVIA
501: EFMTPAMVIM LEEARKLPSP LPAAAEAARE RRPGCKGGGD LHYVIRQRLE LWSKVRREVP LMYQPSSEQE DVQLTALFRE ASLEAIDRAM HHDIYLVPTF
601: TPYYPFRRNN TTNLDRSLST TPSVLKCLTP LTFKYMFDRS FYSIKFMKYV KLYVYIKIYL TMNQMI
101: VAFNDGPVKE YSSGLLDVSG DGRSIAGKKI DRLQARGGSG SALMPELQEA VKILDERQGN SRNRVGFILL LTDGDDTTGF RWSRDVIHGA VGKYPVHTFA
201: LGAAHDPEAL LHIAQESRGT YSFVDDGNLD KIAGALAVCL GGLKTVAAVD TRVSLKTAEL GGARIVRVDS GGYESSVACG GASGEVVVGV LYAGEVKSFV
301: VHLHVPAASS TTTFSSVECG YCDAAATVCD HHHHHHCHHR HHQQQLLAIG YSYSHAPGGE AVSIEGHGVF VERPEVAVFS VDGGRQRQTL LPSPVVMQHM
401: VRFELLELVA GFAETEMLSK KGTMQLRGGG ARAGDVLQGK WEEFRRARQF WGGVELDGLE EDVDAMVASL RSGLAYVSSW VSSHQMQRAT AMGSPEKVIA
501: EFMTPAMVIM LEEARKLPSP LPAAAEAARE RRPGCKGGGD LHYVIRQRLE LWSKVRREVP LMYQPSSEQE DVQLTALFRE ASLEAIDRAM HHDIYLVPTF
601: TPYYPFRRNN TTNLDRSLST TPSVLKCLTP LTFKYMFDRS FYSIKFMKYV KLYVYIKIYL TMNQMI
001: MGTRWRRMKL ALGLNLCTYL PRTLEESPTP LNSTERLSDV ALLSPLNWPM TPTPSSHGLK LSRNSSKSSK TCSICLNKMK EGGGHALFTA ECSHSFHFHC
101: IASNVKHGNQ VCPVCRAKWK EIPMQHPSFD LPYLFARSYN NDAAISLVHR LPRSRGVMNQ GRGLAPEPSM FDDDERLEQQ LVFSGKSYSD ALENNHPVRM
201: MDLKIYPEVS AVPRADSREK FDVLVHLRAA AMVTGNANSL NNQISRYPRA PVDLVTVLDI SGSMAGTKLA LLKRAMGFVI QNLGSNDRLS VIAFSSTARR
301: LFPLTKMSDA GRQRALQAVN SVVANGGTNI AEGLRKGVKV MEDRRDKNPV ASIILLSDGR DTYTMNQADP NYKLLLPLSM HGCESKRFQI PVHSFGFGSD
401: HDASLMHSVS ETSGGTFSFI ESESVIQDAL AQCIGGLLSV AVQELRLEIE GMCSDVHLSS IKAGSYQSLV SGDGRSGCVD IGDLYADEER DFLISVNIPP
501: QKDGNETPLL KMRCVYKDLL TKEIVTLQSH MLKIQRPETV GQEVVVSIEV DRQRNRFLAA EAMVKARALA EREDLAAGVT AIQNFRVALA ETVSAKSGDG
601: FCVALDRELK EMQERMASRH VYEVSGRAYI LSGLSSHSWQ RATSRGESGD GSSFVQAYYQ TPSMVEMLHR SQATSHHHRL IQPLFASQPK PR
101: IASNVKHGNQ VCPVCRAKWK EIPMQHPSFD LPYLFARSYN NDAAISLVHR LPRSRGVMNQ GRGLAPEPSM FDDDERLEQQ LVFSGKSYSD ALENNHPVRM
201: MDLKIYPEVS AVPRADSREK FDVLVHLRAA AMVTGNANSL NNQISRYPRA PVDLVTVLDI SGSMAGTKLA LLKRAMGFVI QNLGSNDRLS VIAFSSTARR
301: LFPLTKMSDA GRQRALQAVN SVVANGGTNI AEGLRKGVKV MEDRRDKNPV ASIILLSDGR DTYTMNQADP NYKLLLPLSM HGCESKRFQI PVHSFGFGSD
401: HDASLMHSVS ETSGGTFSFI ESESVIQDAL AQCIGGLLSV AVQELRLEIE GMCSDVHLSS IKAGSYQSLV SGDGRSGCVD IGDLYADEER DFLISVNIPP
501: QKDGNETPLL KMRCVYKDLL TKEIVTLQSH MLKIQRPETV GQEVVVSIEV DRQRNRFLAA EAMVKARALA EREDLAAGVT AIQNFRVALA ETVSAKSGDG
601: FCVALDRELK EMQERMASRH VYEVSGRAYI LSGLSSHSWQ RATSRGESGD GSSFVQAYYQ TPSMVEMLHR SQATSHHHRL IQPLFASQPK PR
Arabidopsis Description
Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:F4IU12]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.