Subcellular Localization
min:
: max
Winner_takes_all: golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 5
- golgi 7
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os06t0578700-01 | Rice | golgi | 81.77 | 84.02 |
| OQU75754 | Sorghum | mitochondrion, plastid | 43.14 | 41.68 |
| Zm00001d045456_P001 | Maize | endoplasmic reticulum, plasma membrane | 40.64 | 40.37 |
| Zm00001d036068_P001 | Maize | mitochondrion, plastid | 37.12 | 40.29 |
| Zm00001d036072_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 42.14 | 40.0 |
| Os11t0687100-01 | Rice | nucleus | 42.31 | 39.97 |
| Os04t0266700-00 | Rice | cytosol | 7.36 | 38.6 |
| Zm00001d036066_P001 | Maize | cytosol | 41.3 | 37.14 |
| Os06t0578100-00 | Rice | nucleus | 39.97 | 35.89 |
| Os11t0679000-00 | Rice | cytosol | 24.41 | 25.17 |
| Os11t0650600-00 | Rice | cytosol | 22.41 | 23.55 |
| Os11t0650500-00 | Rice | cytosol | 19.9 | 20.14 |
| Os12t0431700-00 | Rice | cytosol | 6.86 | 19.81 |
| Os03t0403600-01 | Rice | cytosol, extracellular | 12.88 | 18.51 |
| Os12t0203500-00 | Rice | vacuole | 16.89 | 18.43 |
| Os03t0142500-01 | Rice | plasma membrane | 21.24 | 18.3 |
| Os04t0508800-01 | Rice | plasma membrane | 21.57 | 18.22 |
| Os02t0619600-01 | Rice | mitochondrion | 21.24 | 17.91 |
| Os08t0126100-00 | Rice | nucleus | 20.57 | 17.47 |
| Os02t0806700-01 | Rice | nucleus | 20.23 | 16.74 |
| Os08t0126000-00 | Rice | plastid | 20.4 | 16.12 |
| Os01t0640200-00 | Rice | cytosol | 15.89 | 15.18 |
| Os04t0101800-01 | Rice | cytosol, mitochondrion, peroxisome, plastid | 14.88 | 12.92 |
| Os10t0464800-00 | Rice | nucleus | 20.4 | 12.86 |
| Os09t0298500-01 | Rice | nucleus | 9.7 | 10.9 |
| Os10t0464500-00 | Rice | extracellular, plasma membrane | 8.53 | 10.49 |
| GSMUA_Achr4P06340_001 | Banana | mitochondrion | 0.5 | 1.56 |
Protein Annotations
| EMBL:AK070289 | EnsemblPlants:Os11t0687200-02 | EnsemblPlantsGene:Os11g0687200 | EntrezGene:4351147 | Gene3D:3.40.50.410 | InterPro:IPR002035 |
| InterPro:IPR036465 | InterPro:VWF_A | InterPro:vWFA_dom_sf | PANTHER:PTHR10579 | PANTHER:PTHR10579:SF57 | PFAM:PF13768 |
| ProteinID:ABA95365.2 | ProteinID:BAF28845.1 | ProteinID:BAT15285.1 | RefSeq:XP_015616047.1 | SEG:seg | SignalP:SignalP-noTM |
| SUPFAM:SSF53300 | TMHMM:TMhelix | UniParc:UPI0000D89B9E | UniProt:Q2QZH2 | MapMan:35.2 | : |
Description
Hypothetical conserved gene. (Os11t0687200-01);von Willebrand factor, type A domain containing protein. (Os11t0687200-02);Hypothetical conserved gene. (Os11t0687200-03)
Coordinates
chr11:+:27841517..27845125
Molecular Weight (calculated)
63732.0 Da
IEP (calculated)
5.862
GRAVY (calculated)
0.095
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MGRLQNLMLL SAGFFSTLLL AQVTSAAAGM TVKVSTTPIF SKIPRAQTNK DFQVLLRIEA PPPVDLKGRV PIDLVAVLDV GGGGMSLEPV KKAMKFAIRQ
101: LSDEDSIAIF GPPMSREVIP KFMNIHGSRR IAEKKVDELE GRRFAHPARS SLDEALKMLE EQPASSSVGR AKFIVLVTDI TRFSSDMPEL SKYPVHAFGL
201: GASHDAAALR LVAQRSQGTY SFLDDANADK VAAALALCLG GLKSVAAVGA RVVLKAASGS GVRIDRISSG GYASSVSQVD GASGEIAIGA LYAGEVKTFV
301: VHLDVPAAPE ISPGEGVCCD QQQLLVASLD GQLYTSGGGV DVIDDDAAAG GGGPIQDVLV VERPPAAVLP KVPSAIVVNH IFQFRVLEMV DAFINDEILL
401: RRTPATTGRT KDVDVDDDRG MKLLARWERF VLEHQFWVGL DLGSLDGEIT AVANSLRKQQ HVVGGVLPSS SMAAYIFSWM SSYKMQRPTA MGSPAKVVGL
501: FVTLEVHLTL QVAITAENGG GGGDGECEYS CVEQLPPAPP LLVASGRDDD SYRFNAAYEG VISLDDINQF MIKIYQGMVK ANNLKQCHLM NQQPRAVA
101: LSDEDSIAIF GPPMSREVIP KFMNIHGSRR IAEKKVDELE GRRFAHPARS SLDEALKMLE EQPASSSVGR AKFIVLVTDI TRFSSDMPEL SKYPVHAFGL
201: GASHDAAALR LVAQRSQGTY SFLDDANADK VAAALALCLG GLKSVAAVGA RVVLKAASGS GVRIDRISSG GYASSVSQVD GASGEIAIGA LYAGEVKTFV
301: VHLDVPAAPE ISPGEGVCCD QQQLLVASLD GQLYTSGGGV DVIDDDAAAG GGGPIQDVLV VERPPAAVLP KVPSAIVVNH IFQFRVLEMV DAFINDEILL
401: RRTPATTGRT KDVDVDDDRG MKLLARWERF VLEHQFWVGL DLGSLDGEIT AVANSLRKQQ HVVGGVLPSS SMAAYIFSWM SSYKMQRPTA MGSPAKVVGL
501: FVTLEVHLTL QVAITAENGG GGGDGECEYS CVEQLPPAPP LLVASGRDDD SYRFNAAYEG VISLDDINQF MIKIYQGMVK ANNLKQCHLM NQQPRAVA
001: MVSKWKKMKL ALSLNLCNYL PRTLEEEPPS LALNSAETLS DAALLSPLNW PMTPTPSSYR RRLSRSSSKS SKTCSICLNK MKEGCGHAIF TAECSHMFHF
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
101: HCIASNVKHG NQVCPVCRAK WKEIPIQKPS LDLPYYPFDR CNNDAAISLF RCLPPSQRAI TQGHPEPATF DDDERLEEQI VFDGETEVLK KENRDYVRMM
201: DMKVYPEVSA VPQSKSCENF DVLVHLKAVT GDQISQYRRA PIDLVTVLDI SGSMGGTKLA LLKRAMGFVI QNLGSSDRLS VIAFSSTARR LFPLTRMSDA
301: GRQLALQAVN SLVANGGTNI VDGLRKGAKV MEDRLERNSV ASIILLSDGR DTYTTNHPDP SYKVMLPQIS VHSFGFGSDH DASVMHSVSE VSGGTFSFIE
401: SESVIQDALA QCIGGLLSVA VQELRVEIEG VSPNVRLSSI KAGSYSSLVT GDGHSGLVDL GDLYADEERD FLVSINIPVE EDGHTPLLKL RCLYINPLTK
501: EITTLESHVL QIRRPEYVAE EKVVPIEVVR QRNRFLAAEA MAQARTLAEH GDLEAAVKAI ENFRLVLAET VAAKSCDRFC VALDSELKEM QGRMRSSHMY
601: EASGRAYILS GLSSHSWQRA TARGNSRDSS SFVQAYQTPS MAEMLRRSQA MFLVSPSHHR LIQPLLSFAS QPKPR
Arabidopsis Description
Zinc finger (C3HC4-type RING finger) family protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LN98]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.